chore: Simplify the harbor/swebench example to use pypi packages

adapters/common/src/nemo_fabric_adapters/common/utils.py

@@ -186,11 +186,6 @@ def merge_unique(*values: Any) -> list[str]:
 def without_none(mapping: dict[str, Any]) -> dict[str, Any]:
     return {key: value for key, value in mapping.items() if value is not None}
 
-
-def without_none(mapping: dict[str, Any]) -> dict[str, Any]:
-    return {key: value for key, value in mapping.items() if value is not None}
-
-
 def dump_yaml(value: dict[str, Any]) -> str:
     try:
         import yaml

examples/harbor/calculator/README.md

@@ -78,7 +78,7 @@ Expected Harbor summary: one trial, zero exceptions, and mean reward `1.000`.
 ```bash
 : "${NVIDIA_API_KEY:?Export NVIDIA_API_KEY before running Hermes Agent}"
 
-uv run --extra runtime --extra harbor harbor run \
+uv run --extra runtime --extra harbor --extra hermes-agent harbor run \
   --path "$TASK_DIR" \
   --agent nemo_fabric.integrations.harbor:FabricAgent \
   --model nvidia/nemotron-3-nano-30b-a3b \
@@ -102,7 +102,7 @@ typed config. The API key is passed separately as a task credential.
 ```bash
 : "${NVIDIA_API_KEY:?Export NVIDIA_API_KEY before running Hermes Agent}"
 
-uv run --extra runtime --extra harbor harbor run \
+uv run --extra runtime --extra harbor --extra hermes-agent --extra relay harbor run \
   --path "$TASK_DIR" \
   --agent nemo_fabric.integrations.harbor:FabricAgent \
   --model nvidia/nemotron-3-nano-30b-a3b \
@@ -142,7 +142,7 @@ Claude authentication variables selected by the adapter; this command uses
 ```bash
 : "${ANTHROPIC_API_KEY:?Export ANTHROPIC_API_KEY before running Claude}"
 
-uv run --extra runtime --extra harbor harbor run \
+uv run --extra runtime --extra harbor --extra claude harbor run \
   --path "$TASK_DIR" \
   --agent nemo_fabric.integrations.harbor:FabricAgent \
   --model anthropic/claude-sonnet-4-5 \

examples/harbor/swebench/.gitignore

@@ -2,5 +2,3 @@
 # SPDX-License-Identifier: Apache-2.0
 
 .relay/
-.wheelhouse/
-.fabric-package

examples/harbor/swebench/README.md

@@ -19,34 +19,30 @@ then continue in the same shell. Export `NVIDIA_API_KEY` for Hermes Agent runs o
 
 ## Prepare the Task Bundle
 
-Build the NeMo Fabric wheels and Relay executable that will be uploaded into the
-isolated task container:
+Build the standalone Relay executable that will be uploaded into the isolated
+task container for the Claude walkthrough:
 
-> **TEMP — remove when NeMo Fabric is released:** This source-checkout bootstrap is
-> needed only while NeMo Fabric wheels are unavailable from PyPI. At release, the
-> docs writer should replace `FABRIC_PACKAGE` with a pinned PyPI requirement and
-> remove `prepare_swebench.sh`, `.fabric-package`, `.wheelhouse`,
-> `FABRIC_FIND_LINKS`, and every `PIP_FIND_LINKS` argument. If the Claude Relay
-> executable is not yet distributed or discovered automatically, retain only
-> the Relay CLI preparation until that is resolved.
+> **TEMP — replace the pre-release alpha tag with a stable release once available.**
 
 ```bash
 cd "$(git rev-parse --show-toplevel)"
-./examples/harbor/prepare_swebench.sh
 
 export FABRIC_AGENT='nemo_fabric.integrations.harbor:FabricAgent'
 export FABRIC_BUNDLE="$PWD/examples/harbor/swebench"
-export FABRIC_PACKAGE="$(< "$FABRIC_BUNDLE/.fabric-package")"
-export FABRIC_FIND_LINKS='/tmp/nemo-fabric-config/.wheelhouse'
+export FABRIC_PACKAGE='nemo-fabric[claude,harbor,hermes-agent,relay,runtime]==0.1.0a20260724'
 export RUNS_DIR="$PWD/.tmp/harbor/fabric-swebench"
+
+curl -fsSL https://raw.githubusercontent.com/NVIDIA/NeMo-Relay/main/install.sh |
+  NEMO_RELAY_VERSION=0.6.0 sh -s -- \
+    --install-dir "$FABRIC_BUNDLE/.relay/bin"
 ```
 
-The preparation script builds the native runtime in a manylinux2014 container,
-builds the standalone Relay 0.6.0 CLI in Debian Bullseye, and writes the exact
-task-local package requirement to `.fabric-package`. The generated files are
-ignored by Git. The uploaded bundle contains adapter descriptors, the example
-MCP server, generated wheels, and Relay; it does not contain a persisted
-`FabricConfig`.
+The curl command downloads and installs the standalone NeMo Relay 0.6.0 CLI tool
+and verifies its checksum. For other installation methods, refer to the
+[NeMo Relay installation instructions](../../../docs/getting-started/install.mdx#install-nemo-relay).
+
+The generated files are ignored by Git. The uploaded bundle contains the example
+MCP server and Relay; it does not contain a persisted `FabricConfig`.
 
 Keep this shell open for the commands below.
 
@@ -61,7 +57,6 @@ uv run --extra runtime --extra harbor harbor run \
   --ak fabric_adapter_id=nvidia.fabric.hermes \
   --ak fabric_config_bundle="$FABRIC_BUNDLE" \
   --ak "fabric_package=$FABRIC_PACKAGE" \
-  --ae "PIP_FIND_LINKS=$FABRIC_FIND_LINKS" \
   --install-only \
   --job-name django-13741-install \
   --jobs-dir "$RUNS_DIR" \
@@ -84,7 +79,6 @@ uv run --extra runtime --extra harbor harbor run \
   --ak fabric_adapter_id=nvidia.fabric.hermes \
   --ak fabric_config_bundle="$FABRIC_BUNDLE" \
   --ak "fabric_package=$FABRIC_PACKAGE" \
-  --ae "PIP_FIND_LINKS=$FABRIC_FIND_LINKS" \
   --ae "NVIDIA_API_KEY=$NVIDIA_API_KEY" \
   --job-name django-13741-hermes \
   --jobs-dir "$RUNS_DIR" \
@@ -115,7 +109,6 @@ uv run --extra runtime --extra harbor harbor run \
   --ak fabric_telemetry=relay \
   --ak 'fabric_harness_settings={"nemo_relay_command":"/tmp/nemo-fabric-config/.relay/bin/nemo-relay"}' \
   --ak "fabric_package=$FABRIC_PACKAGE" \
-  --ae "PIP_FIND_LINKS=$FABRIC_FIND_LINKS" \
   --ae "ANTHROPIC_API_KEY=$ANTHROPIC_API_KEY" \
   --job-name django-13741-claude \
   --jobs-dir "$RUNS_DIR" \
@@ -154,7 +147,6 @@ uv run --extra runtime --extra harbor harbor run \
   --ak fabric_config_bundle="$FABRIC_BUNDLE" \
   --ak fabric_telemetry=relay \
   --ak "fabric_package=$FABRIC_PACKAGE" \
-  --ae "PIP_FIND_LINKS=$FABRIC_FIND_LINKS" \
   --ae "NVIDIA_API_KEY=$NVIDIA_API_KEY" \
   --job-name django-13741-hermes-skill \
   --jobs-dir "$RUNS_DIR" \
@@ -245,7 +237,6 @@ uv run --extra runtime --extra harbor harbor run \
   --ak fabric_config_bundle="$FABRIC_BUNDLE" \
   --ak fabric_telemetry=relay \
   --ak "fabric_package=$FABRIC_PACKAGE" \
-  --ae "PIP_FIND_LINKS=$FABRIC_FIND_LINKS" \
   --ae "NVIDIA_API_KEY=$NVIDIA_API_KEY" \
   --job-name swebench-verified-hermes-5 \
   --jobs-dir "$RUNS_DIR" \

examples/harbor/swebench/sample-artifacts/README.md

@@ -24,5 +24,5 @@ ATOF and ATIF output before running the example yourself.
 The checked-in trajectories record Relay 0.5.0 and the earlier
 `nvidia/nemotron-3-nano` model identifier because they are historical evidence
 from the original runs. New runs use the compatible Relay CLI version pinned by
-[`prepare_swebench.sh`](../../prepare_swebench.sh) and the model selected in the
-current walkthrough; do not treat sample metadata as installation guidance.
+the [task-bundle setup](../README.md#prepare-the-task-bundle) in the walkthrough
+and the selected model; do not treat sample metadata as installation guidance.

pyproject.toml

@@ -126,6 +126,7 @@ nemo-fabric-adapters-hermes = { path = "adapters/hermes", editable = true }
 [tool.pytest.ini_options]
 asyncio_mode = "auto"
 asyncio_default_fixture_loop_scope = "session"
+testpaths = ["tests"]
 
 [tool.ruff.lint]
 # flake8-bugbear: enforce only the cached-instance-method rule (B019).

tests/e2e/test_cli_scaffold.py

@@ -70,7 +70,7 @@ def test_generated_rust_scaffold_builds(tmp_path: Path):
     manifest = (destination / "Cargo.toml").read_text()
     assert "[workspace]" in manifest
     core_dependency = tomllib.loads(manifest)["dependencies"]["nemo-fabric-core"]
-    assert Path(core_dependency["path"]) == ROOT / "crates/fabric-core"
+    assert Path(core_dependency["path"]).samefile(ROOT / "crates/fabric-core")
     expected_version = tomllib.loads((ROOT / "Cargo.toml").read_text())["workspace"][
         "package"
     ]["version"]

tests/e2e/test_hermes_e2e.py

@@ -260,5 +260,6 @@ async def test_atif_artifacts(self):
         last_step = steps[-1]
         assert last_step["source"] == "agent"
         assert last_step["message"] == self.output["response"]
+        assert last_step["model_name"] == "nvidia/nemotron-3-nano-30b-a3b"
         assert last_step["extra"]["invocation"]["framework"] == "nemo_relay"
         assert last_step["extra"]["invocation"]["status"] == "completed"

tests/integrations/test_harbor_runner.py

@@ -17,7 +17,6 @@
 CALCULATOR_FABRIC_ROOT = CALCULATOR_ROOT / "task" / "environment" / "fabric"
 SWEBENCH_ROOT = ROOT / "examples" / "harbor" / "swebench"
 SWEBENCH_README = SWEBENCH_ROOT / "README.md"
-SWEBENCH_PREPARE = ROOT / "examples" / "harbor" / "prepare_swebench.sh"
 SWEBENCH_MCP_CONFIG = SWEBENCH_ROOT / "mcp" / "repo-inspector.mcp.json"
 INTEGRATION_README = ROOT / "examples" / "harbor" / "README.md"
 SDK_INTEGRATION_README = (
@@ -287,7 +286,7 @@ def test_harbor_calculator_documents_explicit_cli_commands():
     swebench = SWEBENCH_README.read_text(encoding="utf-8")
 
     assert "run.sh" not in calculator
-    assert calculator.count("uv run --extra runtime --extra harbor harbor run") == 4
+    assert calculator.count(" harbor run \\") == 4
     assert landing.count("uv run --extra runtime --extra harbor harbor run") == 0
     assert swebench.count("uv run --extra runtime --extra harbor harbor run") == 5
     assert "--agent-import-path" not in landing + calculator + swebench
@@ -305,9 +304,13 @@ def test_harbor_calculator_documents_explicit_cli_commands():
     assert "swebench/README.md" in landing
     assert "fabric_adapter_id" in landing
     assert 'export TMPDIR="$HOME/harbor-tmp"' in landing
-    assert "./examples/harbor/prepare_swebench.sh" in swebench
-    assert 'FABRIC_PACKAGE="$(< "$FABRIC_BUNDLE/.fabric-package")"' in swebench
-    assert '--ae "PIP_FIND_LINKS=$FABRIC_FIND_LINKS"' in swebench
+    assert "raw.githubusercontent.com/NVIDIA/NeMo-Relay/main/install.sh" in swebench
+    assert (
+        "FABRIC_PACKAGE="
+        "'nemo-fabric[claude,harbor,hermes-agent,relay,runtime]==0.1.0a20260724'"
+        in swebench
+    )
+    assert "PIP_FIND_LINKS" not in swebench
     assert "--dataset swe-bench/swe-bench-verified" in swebench
     for flag in (
         "--path",
@@ -340,17 +343,14 @@ def test_harbor_generated_paths_are_ignored():
     assert "task/environment/.vendor.*/" in ignore
 
 
-def test_swebench_bootstrap_pins_a_supported_relay_cli():
+def test_swebench_setup_pins_a_supported_relay_cli():
     from nemo_fabric_adapters.common.relay_gateway import RELAY_MINIMUM_VERSION
 
-    prepare = SWEBENCH_PREPARE.read_text(encoding="utf-8")
+    swebench = SWEBENCH_README.read_text(encoding="utf-8")
     minimum = ".".join(str(part) for part in RELAY_MINIMUM_VERSION)
 
-    assert f'relay_cli_version="{minimum}"' in prepare
-    assert '"nemo-relay $relay_cli_version"' in prepare
-    assert 'nemo-relay-cli --version "$relay_cli_version" --locked' in prepare
-    assert '"$(uname -s)" != "Linux"' in prepare
-    assert '"$(uname -m)" != "x86_64"' in prepare
+    assert f"NEMO_RELAY_VERSION={minimum}" in swebench
+    assert '--install-dir "$FABRIC_BUNDLE/.relay/bin"' in swebench
 
 
 def test_harbor_calculator_setup_and_solution_fail_fast():