fix bugs found in pbl and ozone 3d diagnostic tendencies

physics/GFS_PBL_generic.F90

@@ -591,7 +591,7 @@ subroutine GFS_PBL_generic_post_run (im, levs, nvdiff, ntrac,
   !    &     dtf,' kdt=',kdt,' lat=',lat
   !       endif
 
-        if (ldiag3d .and. flag_for_pbl_generic_tend .and. lssav) then
+        if_diag: if (ldiag3d .and. flag_for_pbl_generic_tend .and. lssav) then
           if (lsidea) then
             dt3dt(1:im,:) = dt3dt(1:im,:) + dtdt(1:im,:)*dtf
           else
@@ -615,8 +615,8 @@ subroutine GFS_PBL_generic_post_run (im, levs, nvdiff, ntrac,
               enddo
             enddo
           endif
-        endif
-
+        endif if_diag
+        
       endif   ! end if_lssav
 
       end subroutine GFS_PBL_generic_post_run

physics/moninedmf.f

@@ -1068,7 +1068,7 @@ subroutine hedmf_run (ix,im,km,ntrac,ntcw,dv,du,tau,rtg,          &
           enddo
         enddo
         if(lssav .and. ldiag3d .and. ntoz>0 .and. qdiag3d .and.         &
-     &               flag_for_pbl_generic_tend) then
+     &               .not. flag_for_pbl_generic_tend) then
           kk = ntoz
           is = (kk-1) * km
           do k = 1, km

physics/satmedmfvdifq.F

@@ -65,6 +65,7 @@ subroutine satmedmfvdifq_run(ix,im,km,ntrac,ntcw,ntiw,ntke,       &
      &     prsi,del,prsl,prslk,phii,phil,delt,                          &
      &     dspheat,dusfc,dvsfc,dtsfc,dqsfc,hpbl,                        &
      &     kinver,xkzm_m,xkzm_h,xkzm_s,dspfac,bl_upfr,bl_dnfr,          &
+     &     ntoz,du3dt,dv3dt,dt3dt,dq3dt,do3dt,ldiag3d,qdiag3d,          &
      &     errmsg,errflg)
 !
       use machine  , only : kind_phys
@@ -73,9 +74,10 @@ subroutine satmedmfvdifq_run(ix,im,km,ntrac,ntcw,ntiw,ntke,       &
       implicit none
 !
 !----------------------------------------------------------------------
-      integer, intent(in)  :: ix, im, km, ntrac, ntcw, ntiw, ntke
+      integer, intent(in)  :: ix, im, km, ntrac, ntcw, ntiw, ntke, ntoz
       integer, intent(in)  :: kinver(im)
       integer, intent(out) :: kpbl(im)
+      logical, intent(in)  :: ldiag3d,qdiag3d
 !
       real(kind=kind_phys), intent(in) :: grav,rd,cp,rv,hvap,hfus,fv,   &
      &                                    eps,epsm1
@@ -97,6 +99,10 @@ subroutine satmedmfvdifq_run(ix,im,km,ntrac,ntcw,ntiw,ntke,       &
      &                     prsi(ix,km+1), del(ix,km),                   &
      &                     prsl(ix,km),   prslk(ix,km),                 &
      &                     phii(ix,km+1), phil(ix,km)
+      real(kind=kind_phys), intent(inout), dimension(:,:) ::            &
+     &                     du3dt(:,:),    dv3dt(:,:),                   &
+     &                     dt3dt(:,:),    dq3dt(:,:),                   &
+     &                     do3dt(:,:)
       real(kind=kind_phys), intent(out) ::                              &
      &                     dusfc(im),     dvsfc(im),                    &
      &                     dtsfc(im),     dqsfc(im),                    &
@@ -1301,6 +1307,12 @@ subroutine satmedmfvdifq_run(ix,im,km,ntrac,ntcw,ntiw,ntke,       &
             rtg(i,k,1) = rtg(i,k,1)+qtend
             dtsfc(i)   = dtsfc(i)+cont*del(i,k)*ttend
             dqsfc(i)   = dqsfc(i)+conq*del(i,k)*qtend
+            if(ldiag3d) then
+               dt3dt(i,k) = dt3dt(i,k)+dspfac*ttend
+               if(qdiag3d) then
+                  dq3dt(i,k) = dq3dt(i,k)+dspfac*qtend
+               endif
+            endif
          enddo
       enddo
 !
@@ -1311,6 +1323,9 @@ subroutine satmedmfvdifq_run(ix,im,km,ntrac,ntcw,ntiw,ntke,       &
             do i = 1, im
               qtend = (f2(i,k+is)-q1(i,k,kk))*rdt
               rtg(i,k,kk) = rtg(i,k,kk)+qtend
+              if(kk==ntoz) then
+                 do3dt(i,k) = do3dt(i,k)+qtend
+              endif
             enddo
           enddo
         enddo
@@ -1325,6 +1340,9 @@ subroutine satmedmfvdifq_run(ix,im,km,ntrac,ntcw,ntiw,ntke,       &
 !         ttend = tem / cp
           ttend = diss(i,k) / cp
           tdt(i,k) = tdt(i,k) + dspfac * ttend
+          if(ldiag3d) then
+             dt3dt(i,k) = dt3dt(i,k)+dspfac * ttend
+          endif
         enddo
       enddo
       endif
@@ -1401,6 +1419,11 @@ subroutine satmedmfvdifq_run(ix,im,km,ntrac,ntcw,ntiw,ntke,       &
             dv(i,k)  = dv(i,k)+vtend
             dusfc(i) = dusfc(i)+conw*del(i,k)*utend
             dvsfc(i) = dvsfc(i)+conw*del(i,k)*vtend
+
+            if(ldiag3d) then
+               du3dt(i,k) = du3dt(i,k) + utend
+               dv3dt(i,k) = dv3dt(i,k) + vtend
+            endif
          enddo
       enddo
 !

physics/satmedmfvdifq.meta

@@ -578,6 +578,75 @@
   kind = kind_phys
   intent = in
   optional = F
+[ntoz]
+  standard_name = index_for_ozone
+  long_name = tracer index for ozone mixing ratio
+  units = index
+  dimensions = ()
+  type = integer
+  intent = in
+  optional = F
+[du3dt]
+  standard_name = cumulative_change_in_x_wind_due_to_PBL
+  long_name = cumulative change in x wind due to PBL
+  units = m s-1
+  dimensions = (horizontal_dimension,vertical_dimension)
+  type = real
+  kind = kind_phys
+  intent = inout
+  optional = F
+[dv3dt]
+  standard_name = cumulative_change_in_y_wind_due_to_PBL
+  long_name = cumulative change in y wind due to PBL
+  units = m s-1
+  dimensions = (horizontal_dimension,vertical_dimension)
+  type = real
+  kind = kind_phys
+  intent = inout
+  optional = F
+[dt3dt]
+  standard_name = cumulative_change_in_temperature_due_to_PBL
+  long_name = cumulative change in temperature due to PBL
+  units = K
+  dimensions = (horizontal_dimension,vertical_dimension)
+  type = real
+  kind = kind_phys
+  intent = inout
+  optional = F
+[dq3dt]
+  standard_name = cumulative_change_in_water_vapor_specific_humidity_due_to_PBL
+  long_name = cumulative change in water vapor specific humidity due to PBL
+  units = kg kg-1
+  dimensions = (horizontal_dimension,vertical_dimension)
+  type = real
+  kind = kind_phys
+  intent = inout
+  optional = F
+[do3dt]
+  standard_name = cumulative_change_in_ozone_mixing_ratio_due_to_PBL
+  long_name = cumulative change in ozone mixing ratio due to PBL
+  units = kg kg-1
+  dimensions = (horizontal_dimension,vertical_dimension)
+  type = real
+  kind = kind_phys
+  intent = inout
+  optional = F
+[ldiag3d]
+  standard_name = flag_diagnostics_3D
+  long_name = flag for 3d diagnostic fields
+  units = flag
+  dimensions = ()
+  type = logical
+  intent = inout
+  optional = F
+[qdiag3d]
+  standard_name = flag_tracer_diagnostics_3D
+  long_name = flag for 3d tracer diagnostic fields
+  units = flag
+  dimensions = ()
+  type = logical
+  intent = inout
+  optional = F
 [errmsg]
   standard_name = ccpp_error_message
   long_name = error message for error handling in CCPP