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Implementation of Zanna-Bolton-2020 equation discovery model of mesoscale momentum fluxes #344

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Implementation of Zanna-Bolton-2020 equation discovery model of mesoscale momentum fluxes #344

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5949c58
Computed 3 invariants of velocity gradien tensor
Pperezhogin Jan 11, 2022
f3e4a8a
Implimenting function to time-stepping
Pperezhogin Jan 11, 2022
386973e
Parameterization is ready
Pperezhogin Jan 12, 2022
c80c4e9
Small cleaning
Pperezhogin Feb 9, 2022
6699edb
Add comments
Pperezhogin Feb 10, 2022
a95e324
Add formal control structure and init
Pperezhogin Feb 10, 2022
1f0f932
Continue initialization
Pperezhogin Feb 10, 2022
55eecd7
Remove from time-stepping
Pperezhogin Feb 10, 2022
41e4a47
initialization is moved to MOM_hor_visc module
Pperezhogin Feb 10, 2022
bea98ef
processing of use_ZB2020 flag
Pperezhogin Feb 10, 2022
7e00328
Add configuration description
Pperezhogin Feb 11, 2022
ed85eed
Parameter fetching works
Pperezhogin Feb 11, 2022
bde4f59
Config for bilap smagorinsky is made
Pperezhogin Feb 11, 2022
f36520e
update diag_table with ZB trend
Pperezhogin Feb 11, 2022
8f88768
Change position of call of ZB2020
Pperezhogin Feb 11, 2022
5249502
Description of energy is added.
Pperezhogin Feb 11, 2022
cc5f502
All diagnostics will be applied
Pperezhogin Feb 11, 2022
12bee93
Testing made. Problems with dims. To do testing, make ZB2020 true as …
Pperezhogin Feb 11, 2022
6e3e4ed
test dims passed
Pperezhogin Feb 11, 2022
677f139
MOM_override and diag_table set up
Pperezhogin Feb 12, 2022
7ccf7c4
bash basher
Pperezhogin Feb 12, 2022
bda0274
Small update before diagnostics
Pperezhogin Feb 14, 2022
05e42f1
First figures on grid convergence
Pperezhogin Feb 14, 2022
1e1de70
new plotter of snapshot
Pperezhogin Feb 14, 2022
b07e575
EKE
Pperezhogin Feb 14, 2022
d52c7de
EKE 2
Pperezhogin Feb 14, 2022
ed5a5e4
Full energy analysis
Pperezhogin Feb 14, 2022
e18577f
plot_domain
Pperezhogin Feb 15, 2022
08569a0
New plot of model domain
Pperezhogin Feb 15, 2022
dce022b
Add experiment labels
Pperezhogin Feb 15, 2022
d8dbfdb
Energy cospectrum
Pperezhogin Feb 15, 2022
3b2c310
Sign + AZ2017
Pperezhogin Feb 16, 2022
63ffdf9
Update on energy cospectrum and leith experiment
Pperezhogin Feb 16, 2022
fdd61ff
Conservative discretization
Pperezhogin Feb 17, 2022
afe1a12
Conservative discretization 1
Pperezhogin Feb 17, 2022
7a00e0b
Conservative discretization 2
Pperezhogin Feb 17, 2022
97eb2e7
Semi-conservative and non-conservative passed all tests
Pperezhogin Feb 17, 2022
88725d4
Add new overrides
Pperezhogin Feb 17, 2022
7417dad
The first energy-cons algorithm which pass test. Error 2.5
Pperezhogin Feb 18, 2022
4c5f966
UPD notebook
Pperezhogin Feb 18, 2022
8dd6104
Add smoothing. Does not pass tests!!!
Pperezhogin Feb 18, 2022
917ec45
Smooth filter pass test.grid
Pperezhogin Feb 18, 2022
f76aa42
filter results
Pperezhogin Feb 18, 2022
fbd0a09
tests are passed
Pperezhogin Feb 18, 2022
8b8917c
Window function
Pperezhogin Mar 22, 2022
3883a20
Different window functions
Pperezhogin Mar 22, 2022
f75a821
Cospectrum window
Pperezhogin Mar 22, 2022
cc5a09b
cospectrum-spectrum
Pperezhogin Mar 22, 2022
30e424e
upd
Pperezhogin Apr 4, 2022
c8a5a29
Remove fully conservative scheme, small updates
Pperezhogin Apr 4, 2022
c40c683
New vorticity filter with dirichlet BC
Pperezhogin Apr 4, 2022
2f45a08
smooth in center
Pperezhogin Apr 4, 2022
8beeae7
Iterative lowpass-highpass filter
Pperezhogin Apr 5, 2022
9aed940
highpass-lowpass filter. Tests are not passed. GME filters also do no…
Pperezhogin Apr 5, 2022
b028073
Segfault in low_pass_filter, in the second usage
Pperezhogin Apr 5, 2022
b1d0002
All tests are passed except of dim
Pperezhogin Apr 8, 2022
938d146
smooth_q pass dim=t test. smooth_T not
Pperezhogin Apr 8, 2022
751a318
Overflow occurs WITHOUT violation of min-max criteria
Pperezhogin Apr 9, 2022
c9f1609
Well behaved filters (visually)
Pperezhogin Apr 18, 2022
b31dcf2
All tests are passed!
Pperezhogin Apr 18, 2022
229ad35
New high order low-pass/high-pass filters
Pperezhogin Apr 20, 2022
c0e675b
New parameterization for amplitude
Pperezhogin Apr 21, 2022
e7eb2ef
New launcher
Pperezhogin Apr 21, 2022
805b964
Stochastic scheduler!!!
Pperezhogin Apr 22, 2022
f6e0164
Automatic experiment folder
Pperezhogin Apr 22, 2022
dfb8590
copy() and idx bugs in iterator + Deformation radius
Pperezhogin Apr 22, 2022
45eedec
Set of 210 experiments, for R4 takes 2hours on 10 cores
Pperezhogin Apr 22, 2022
2e01520
Parameter sesitivity anf filters study
Pperezhogin Apr 26, 2022
5fb513f
Add animation and further analysis
Pperezhogin May 2, 2022
5c23738
Merge of the ZB project and software for analysis of the experiments
Pperezhogin Mar 1, 2023
b000b14
Update of the launcher
Pperezhogin Mar 1, 2023
733b869
Different amplitudes in fluid layers
Pperezhogin Mar 1, 2023
9177a1f
Filter experiements
Pperezhogin Mar 1, 2023
2582568
Manual choosing of filters
Pperezhogin Mar 7, 2023
66714dd
plot KE transfer
Pperezhogin Mar 8, 2023
e7ab750
New plotter with Nyquist frequency
Pperezhogin Mar 8, 2023
b7bb1a4
Energy transfer analysis for performed experiments
Pperezhogin Mar 8, 2023
4999fba
Arakawa-Sadourny Energy-conserving numerical scheme
Pperezhogin Mar 8, 2023
f02563d
subgrid forcing
Pperezhogin Mar 8, 2023
2f925e4
SGS spectral properties
Pperezhogin Mar 8, 2023
bd9903b
plot power specturm
Pperezhogin Mar 8, 2023
97ebae2
Offline model ZB
Pperezhogin Mar 9, 2023
f3bc1c9
Testing of ZB
Pperezhogin Mar 9, 2023
4b0830e
Filters in ZB2020
Pperezhogin Mar 9, 2023
cdebd59
small change in code
Pperezhogin Mar 9, 2023
17616c1
Testing w.r.t. Cartesian code
Pperezhogin Mar 9, 2023
74e6903
Check trace-free simulations.
Pperezhogin Mar 9, 2023
8e4c423
divergence operator
Pperezhogin Mar 9, 2023
ca1bb21
Smagorinsky offline
Pperezhogin Mar 10, 2023
8613f39
Linearity in the amplitude
Pperezhogin Mar 10, 2023
da1975f
Offline analysis in batch jobs
Pperezhogin Mar 10, 2023
3becbb9
Reynolds, SSM, ADM, JansenHeld
Pperezhogin Mar 11, 2023
526b475
Comparison of EXP205 and flux-filtered model
Pperezhogin Mar 16, 2023
bc05cb1
Generalization experiments
Pperezhogin Mar 17, 2023
870acfd
Remove unnecessary debuggin information in Fortran code
Pperezhogin Mar 17, 2023
5bc3d5f
Small-scale filter
Pperezhogin Mar 18, 2023
6afc597
Generalization of ZB-ssd model; trace analysis; Jansen Held configura…
Pperezhogin Mar 22, 2023
0c3fbff
Jansen Held update
Pperezhogin Mar 28, 2023
7cfdd1f
Cleaning
Pperezhogin Mar 28, 2023
ddb3f05
remove gitignore
Pperezhogin Mar 28, 2023
e995a1f
Cleaning output fields
Pperezhogin Mar 28, 2023
3b20622
merge with dev/gfdl
Pperezhogin Mar 29, 2023
e6c7a92
All tests are passed: order of computations are introduced to filter …
Pperezhogin Mar 30, 2023
d9e5be0
Default parameters
Pperezhogin Mar 30, 2023
6042051
gitignore
Pperezhogin Mar 30, 2023
d041033
alignment of code
Pperezhogin Mar 30, 2023
1d587b0
1. Trailing white space removed
Pperezhogin Apr 10, 2023
8a47d77
2. Add doxygen comments to all subroutines and their arguments.
Pperezhogin Apr 10, 2023
5daafc0
4. Remove array-syntax. Regression did not change. Tests are passed.
Pperezhogin Apr 11, 2023
2d453c7
5. Private control structure ZB2020_CS
Pperezhogin Apr 11, 2023
08058cd
7 and 9. Do not log new parameters and do not register diagnostics wh…
Pperezhogin Apr 11, 2023
00edd8d
11. Warning messages with MOM_error
Pperezhogin Apr 11, 2023
e64b0d9
6 and 8. Improve parameters' names and their description
Pperezhogin Apr 11, 2023
bf7ccd9
10. Fix units. Also, improving comments and final cleaning. Tests/Reg…
Pperezhogin Apr 12, 2023
d105439
Fix doxygen line length error
Pperezhogin Apr 12, 2023
2db0a0d
Merge branch 'dev/gfdl' into PR_ZB_2020
Pperezhogin Apr 12, 2023
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