NOAA-EMC · DavidHuber-NOAA · Mar 27, 2025 · Feb 25, 2025 · Feb 26, 2025 · Feb 27, 2025
@@ -20,6 +20,7 @@ nohup.out
 exec/
 build*/
 install*/
+venv/
 
 # Ignore fix directory symlinks
 #------------------------------

@@ -0,0 +1 @@
+../gfs/config.aero.j2
@@ -6,24 +6,24 @@
 echo "BEGIN: config.base"
 
 # Machine environment
-export machine="@MACHINE@"
+export machine="{{ MACHINE }}"
 
 # EMC parallel or NCO production
 export RUN_ENVIR="emc"
 
 # Account, queue, etc.
-export ACCOUNT="@ACCOUNT@"
-export QUEUE="@QUEUE@"
-export QUEUE_SERVICE="@QUEUE_SERVICE@"
-export PARTITION_BATCH="@PARTITION_BATCH@"
-export PARTITION_SERVICE="@PARTITION_SERVICE@"
-export RESERVATION="@RESERVATION@"
+export ACCOUNT="{{ ACCOUNT }}"
+export QUEUE="{{ QUEUE }}"
+export QUEUE_SERVICE="{{ QUEUE_SERVICE }}"
+export PARTITION_BATCH="{{ PARTITION_BATCH }}"
+export PARTITION_SERVICE="{{ PARTITION_SERVICE }}"
+export RESERVATION="{{ RESERVATION }}"
 
 # Project to use in mass store:
-export HPSS_PROJECT="@HPSS_PROJECT@"
+export HPSS_PROJECT="{{ HPSS_PROJECT }}"
 
 # Directories relative to installation areas:
-export HOMEgfs=@HOMEgfs@
+export HOMEgfs="{{ HOMEgfs }}"
 export EXECgfs=${HOMEgfs}/exec
 export FIXgfs=${HOMEgfs}/fix
 export PARMgfs=${HOMEgfs}/parm
@@ -35,26 +35,26 @@ export FIXugwd=${FIXgfs}/ugwd
 ########################################################################
 
 # GLOBAL static environment parameters
-export PACKAGEROOT="@PACKAGEROOT@"    # TODO: set via prod_envir in Ops
-export COMROOT="@COMROOT@"    # TODO: set via prod_envir in Ops
-export COMINsyn="@COMINsyn@"
+export PACKAGEROOT="{{ PACKAGEROOT }}"    # TODO: set via prod_envir in Ops
+export COMROOT="{{ COMROOT }}"    # TODO: set via prod_envir in Ops
+export COMINsyn="{{ COMINsyn }}"
 
 # USER specific paths
-export HOMEDIR="@HOMEDIR@"
-export STMP="@STMP@"
-export PTMP="@PTMP@"
-export NOSCRUB="@NOSCRUB@"
+export HOMEDIR="{{ HOMEDIR }}"
+export STMP="{{ STMP }}"
+export PTMP="{{ PTMP }}"
+export NOSCRUB="{{ NOSCRUB }}"
 
 # Base directories for various builds
-export BASE_GIT="@BASE_GIT@"
+export BASE_GIT="{{ BASE_GIT }}"
 
 # Base directory for staged data
-export BASE_DATA="@BASE_DATA@"
+export BASE_DATA="{{ BASE_DATA }}"
 
 # Toggle to turn on/off GFS downstream processing.
-export DO_BUFRSND="@DO_BUFRSND@"     # BUFR sounding products
-export DO_GEMPAK="@DO_GEMPAK@"       # GEMPAK products
-export DO_AWIPS="@DO_AWIPS@"         # AWIPS products
+export DO_BUFRSND="{{ DO_BUFRSND }}"     # BUFR sounding products
+export DO_GEMPAK="{{ DO_GEMPAK }}"       # GEMPAK products
+export DO_AWIPS="{{ DO_AWIPS }}"         # AWIPS products
 
 # NO for retrospective parallel; YES for real-time parallel
 #  arch.sh uses REALTIME for MOS.  Need to set REALTIME=YES
@@ -63,8 +63,8 @@ export DO_AWIPS="@DO_AWIPS@"         # AWIPS products
 export REALTIME="YES"
 
 # Experiment mode (cycled or forecast-only)
-export MODE="@MODE@" # cycled/forecast-only
-export DO_TEST_MODE="@DO_TEST_MODE@" # option to change configuration for automated testing
+export MODE="{{ MODE }}" # cycled/forecast-only
+export DO_TEST_MODE="{{ DO_TEST_MODE }}" # option to change configuration for automated testing
 
 ####################################################
 # DO NOT ADD MACHINE DEPENDENT STUFF BELOW THIS LINE
@@ -80,10 +80,10 @@ export NCP="/bin/cp -p"
 export NMV="/bin/mv"
 export NLN="/bin/ln -sf"
 export VERBOSE="YES"
-export KEEPDATA="@KEEPDATA@"
+export KEEPDATA="{{ KEEPDATA }}"
 export DEBUG_POSTSCRIPT="NO" # PBS only; sets debug=true
-export CHGRP_RSTPROD="@CHGRP_RSTPROD@"
-export CHGRP_CMD="@CHGRP_CMD@"
+export CHGRP_RSTPROD="{{ CHGRP_RSTPROD }}"
+export CHGRP_CMD="{{ CHGRP_CMD }}"
 export NCDUMP="${NETCDF:-${netcdf_c_ROOT:-}}/bin/ncdump"
 export NCLEN="${HOMEgfs}/ush/getncdimlen"
 
@@ -92,17 +92,17 @@ export BASE_ENV="${HOMEgfs}/env"
 export BASE_JOB="${HOMEgfs}/jobs/rocoto"
 
 # EXPERIMENT specific environment parameters
-export SDATE=@SDATE@
-export EDATE=@EDATE@
-export EXP_WARM_START="@EXP_WARM_START@"
+export SDATE="{{ SDATE }}"
+export EDATE="{{ EDATE }}"
+export EXP_WARM_START="{{ EXP_WARM_START }}"
 export assim_freq=6
-export PSLOT="@PSLOT@"
-export EXPDIR="@EXPDIR@/${PSLOT}"
-export ROTDIR="@COMROOT@/${PSLOT}"
+export PSLOT="{{ PSLOT }}"
+export EXPDIR="{{ EXPDIR }}/${PSLOT}"
+export ROTDIR="{{ COMROOT }}/${PSLOT}"
 
 export ARCDIR="${NOSCRUB}/archive/${PSLOT}"
-export ATARDIR="@ATARDIR@"
-export FETCHDIR="@FETCHDIR@"  # HPSS or local directory where IC tarball(s) can be found.
+export ATARDIR="{{ ATARDIR }}"
+export FETCHDIR="{{ FETCHDIR }}"  # HPSS or local directory where IC tarball(s) can be found.
 
 # Commonly defined parameters in JJOBS
 export envir=${envir:-"prod"}
@@ -127,15 +127,15 @@ export SENDDBN=${SENDDBN:-"NO"}
 export DBNROOT=${DBNROOT:-${UTILROOT:-}/fakedbn}
 
 # APP settings
-export APP=@APP@
+export APP="{{ APP }}"
 
 # Defaults:
 export DO_ATM="YES"
 export DO_COUPLED="NO"
 export DO_WAVE="NO"
 export DO_OCN="NO"
 export DO_ICE="NO"
-export DO_EXTRACTVARS="@DO_EXTRACTVARS@" # Option to process and extract a subset of products to save on disk
+export DO_EXTRACTVARS="{{ DO_EXTRACTVARS }}" # Option to process and extract a subset of products to save on disk
 export DO_AERO_FCST="NO"
 export DOBNDPNT_WAVE="NO" # The GEFS buoys file does not currently have any boundary points
 export DOIBP_WAV="NO" # Option to create point outputs from input boundary points
@@ -153,9 +153,9 @@ export OPS_RES="C768" # Do not change
 
 # Resolution specific parameters
 export LEVS=128
-export CASE="@CASECTL@"  # CASE is required in GEFS to determine ocean/ice/wave resolutions
-export CASE_ENS="@CASEENS@"
-export OCNRES="@OCNRES@"
+export CASE="{{ CASECTL }}"  # CASE is required in GEFS to determine ocean/ice/wave resolutions
+export CASE_ENS="{{ CASEENS }}"
+export OCNRES="{{ OCNRES }}"
 export ICERES="${OCNRES}"
 # These are the currently recommended grid-combinations
 case "${CASE}" in
@@ -220,34 +220,34 @@ export FHOUT_ICE=3
 export FHOUT_AERO=3
 
 # GFS cycle info
-export INTERVAL_GFS=@INTERVAL_GFS@ # Frequency of GFS forecast
-export SDATE_GFS=@SDATE_GFS@
+export INTERVAL_GFS="{{ INTERVAL_GFS }}" # Frequency of GFS forecast
+export SDATE_GFS="{{ SDATE_GFS }}"
 
 # set variables needed for use with REPLAY ICs
-export REPLAY_ICS=@REPLAY_ICS@
+export REPLAY_ICS="{{ REPLAY_ICS }}"
 if [[ "${REPLAY_ICS:-NO}" == "YES" ]]; then
     export OFFSET_START_HOUR=$(( assim_freq / 2 ))
     echo "WARNING: Replay ICs require perturbation files, ignoring any previous settings"
     export USE_OCN_ENS_PERTURB_FILES="YES"
     export USE_ATM_ENS_PERTURB_FILES="YES"
 else
     export OFFSET_START_HOUR=0
-    export USE_OCN_ENS_PERTURB_FILES=@USE_OCN_ENS_PERTURB_FILES@
-    export USE_ATM_ENS_PERTURB_FILES=@USE_ATM_ENS_PERTURB_FILES@
+    export USE_OCN_ENS_PERTURB_FILES="{{ USE_OCN_ENS_PERTURB_FILES }}"
+    export USE_ATM_ENS_PERTURB_FILES="{{ USE_ATM_ENS_PERTURB_FILES }}"
 fi
 
 # GFS output and frequency
 export FHMIN_GFS=0
-export FHMAX_GFS="@FHMAX_GFS@"
+export FHMAX_GFS="{{ FHMAX_GFS }}"
 # Intermediate times to stop forecast when running in segments
-breakpnts="@FCST_BREAKPOINTS@"
+breakpnts="{{ FCST_BREAKPOINTS }}"
 export FCST_SEGMENTS="${FHMIN_GFS},${breakpnts:+${breakpnts},}${FHMAX_GFS}"
 
-export FHOUT_GFS=@FHOUT_GFS@
-export FHMAX_HF_GFS=@FHMAX_HF_GFS@
-export FHOUT_HF_GFS=@FHOUT_HF_GFS@
-export FHOUT_OCN_GFS=@FHOUT_OCN_GFS@
-export FHOUT_ICE_GFS=@FHOUT_ICE_GFS@
+export FHOUT_GFS="{{ FHOUT_GFS }}"
+export FHMAX_HF_GFS="{{ FHMAX_HF_GFS }}"
+export FHOUT_HF_GFS="{{ FHOUT_HF_GFS }}"
+export FHOUT_OCN_GFS="{{ FHOUT_OCN_GFS }}"
+export FHOUT_ICE_GFS="{{ FHOUT_ICE_GFS }}"
 export FHMIN_WAV=${OFFSET_START_HOUR:-0}
 export FHOUT_WAV=3
 export FHMAX_HF_WAV=120
@@ -290,7 +290,7 @@ export DO_MERGENSST="NO"
 export DO_STARTMEM_FROM_JEDIICE="NO"
 
 # Hybrid related
-export NMEM_ENS=@NMEM_ENS@
+export NMEM_ENS="{{ NMEM_ENS }}"
 
 # set default member number memdir for control
 # this will be overwridden for the perturbed members
@@ -323,19 +323,19 @@ if [[ ${DONST} = "YES" ]]; then export FNTSFA="        "; fi
 export nst_anl=.true.
 
 # Make the nsstbufr file on the fly or use the GDA version
-export MAKE_NSSTBUFR="@MAKE_NSSTBUFR@"
+export MAKE_NSSTBUFR="{{ MAKE_NSSTBUFR }}"
 
 # Make the aircraft prepbufr file on the fly or use the GDA version
-export MAKE_ACFTBUFR="@MAKE_ACFTBUFR@"
+export MAKE_ACFTBUFR="{{ MAKE_ACFTBUFR }}"
 
 # Verification options
 export DO_METP="NO"         # Run METPLUS jobs - set METPLUS settings in config.metp
 export DO_FIT2OBS="NO"      # Run fit to observations package
 
 # Archiving options
-export VRFYARCH="@VRFYARCH@"        # save verification data locally
-export HPSSARCH="@HPSSARCH@"        # save data to HPSS archive
-export LOCALARCH="@LOCALARCH@"        # save data to local archive
+export VRFYARCH="{{ VRFYARCH }}"        # save verification data locally
+export HPSSARCH="{{ HPSSARCH }}"        # save data to HPSS archive
+export LOCALARCH="{{ LOCALARCH }}"        # save data to local archive
 if [[ ${HPSSARCH} = "YES" ]] && [[ ${LOCALARCH} = "YES" ]]; then
    echo "Both HPSS and local archiving selected.  Please choose one or the other."
    exit 3

@@ -32,7 +32,7 @@ export FHOUT=${FHOUT_GFS}
 export FHOUT_HF=${FHOUT_HF_GFS}
 export FHOUT_OCN=${FHOUT_OCN_GFS}
 export FHOUT_ICE=${FHOUT_ICE_GFS}
-export FHZER=@FHZER@
+export FHZER="{{ FHZER }}"
 
 # Get task specific resources
 source "${EXPDIR}/config.resources" fcst
@@ -55,8 +55,8 @@ export FCSTEXEC="${NET}_model.x"
 
 #######################################################################
 # Model configuration
-export TYPE=@TYPE@
-export MONO=@MONO@
+export TYPE="{{ TYPE }}"
+export MONO="{{ MONO }}"
 
 # Use stratosphere h2o physics
 export h2o_phys=".true."
@@ -268,7 +268,7 @@ else
   export io_layout="1,1"
 fi
 
-export reforecast=@reforecast@
+export reforecast="{{ reforecast }}"
 # Remember config.efcs will over-ride these values for ensemble forecasts
 # if these variables are re-defined there.
 # Otherwise, the ensemble forecast will inherit from config.fcst

@@ -0,0 +1 @@
+../gfs/config.ocn.j2
@@ -7,8 +7,8 @@ echo "BEGIN: config.stage_ic"
 # Get task specific resources
 source "${EXPDIR}/config.resources" stage_ic
 
-export ICSDIR="@ICSDIR@" # User provided ICSDIR; blank if not provided
-export BASE_IC="@BASE_IC@" # Platform home for staged ICs
+export ICSDIR="{{ ICSDIR }}" # User provided ICSDIR; blank if not provided
+export BASE_IC="{{ BASE_IC }}" # Platform home for staged ICs
 
 export STAGE_IC_YAML_TMPL="${PARMgfs}/stage/master_gefs.yaml.j2"
 

@@ -3,7 +3,7 @@
 # UFS-Aerosols settings
 
 # Path to the input data tree
-export AERO_INPUTS_DIR=@AERO_INPUTS_DIR@
+export AERO_INPUTS_DIR="{{ AERO_INPUTS_DIR }}"
 
 export AERO_DIAG_TABLE="${PARMgfs}/ufs/fv3/diag_table.aero"
 export AERO_FIELD_TABLE="${PARMgfs}/ufs/fv3/field_table.aero"

@@ -31,8 +31,8 @@ export JEDI_CONFIG_YAML="${PARMgfs}/gdas/aeroanl_jedi_config.yaml.j2"
 export AERO_STAGE_VARIATIONAL_TMPL="${PARMgfs}/gdas/aero_stage_variational.yaml.j2"
 export AERO_FINALIZE_VARIATIONAL_TMPL="${PARMgfs}/gdas/aero_finalize_variational.yaml.j2"
 
-export io_layout_x=@IO_LAYOUT_X@
-export io_layout_y=@IO_LAYOUT_Y@
+export io_layout_x="{{ IO_LAYOUT_X }}"
+export io_layout_y="{{ IO_LAYOUT_Y }}"
 
 export JEDIEXE="${EXECgfs}/gdas.x"
 

@@ -5,10 +5,10 @@
 
 echo "BEGIN: config.atmanl"
 
-export JCB_ALGO_YAML_VAR=@JCB_ALGO_YAML_VAR@
-export JCB_ALGO_YAML_FV3INC=@JCB_ALGO_YAML_FV3INC@
+export JCB_ALGO_YAML_VAR="{{ JCB_ALGO_YAML_VAR }}"
+export JCB_ALGO_YAML_FV3INC="{{ JCB_ALGO_YAML_FV3INC }}"
 
-export STATICB_TYPE=@STATICB_TYPE@
+export STATICB_TYPE="{{ STATICB_TYPE }}"
 export LOCALIZATION_TYPE="bump"
 export INTERP_METHOD='barycentric'
 
@@ -29,10 +29,10 @@ export VAR_BKG_STAGING_YAML="${PARMgfs}/gdas/staging/atm_var_bkg.yaml.j2"
 export BERROR_STAGING_YAML="${PARMgfs}/gdas/staging/atm_berror_${STATICB_TYPE}.yaml.j2"
 export FV3ENS_STAGING_YAML="${PARMgfs}/gdas/staging/atm_var_fv3ens.yaml.j2"
 
-export layout_x_atmanl=@LAYOUT_X_ATMANL@
-export layout_y_atmanl=@LAYOUT_Y_ATMANL@
-
-export io_layout_x=@IO_LAYOUT_X@
-export io_layout_y=@IO_LAYOUT_Y@
+export layout_x_atmanl="{{ LAYOUT_X_ATMANL }}"
+export layout_y_atmanl="{{ LAYOUT_Y_ATMANL }}"
+"
+export io_layout_x="{{ IO_LAYOUT_X }}"
+export io_layout_y="{{ IO_LAYOUT_Y }}"
 
 echo "END: config.atmanl"
@@ -5,10 +5,10 @@
 
 echo "BEGIN: config.atmensanl"
 
-export JCB_ALGO_YAML_LETKF=@JCB_ALGO_YAML_LETKF@
-export JCB_ALGO_YAML_OBS=@JCB_ALGO_YAML_OBS@
-export JCB_ALGO_YAML_SOL=@JCB_ALGO_YAML_SOL@
-export JCB_ALGO_YAML_FV3INC=@JCB_ALGO_YAML_FV3INC@
+export JCB_ALGO_YAML_LETKF="{{ JCB_ALGO_YAML_LETKF }}"
+export JCB_ALGO_YAML_OBS="{{ JCB_ALGO_YAML_OBS }}"
+export JCB_ALGO_YAML_SOL="{{ JCB_ALGO_YAML_SOL }}"
+export JCB_ALGO_YAML_FV3INC="{{ JCB_ALGO_YAML_FV3INC }}"
 
 export INTERP_METHOD='barycentric'
 
@@ -18,10 +18,10 @@ export JEDI_FIX_YAML="${PARMgfs}/gdas/atm_jedi_fix.yaml.j2"
 export JEDI_CONFIG_YAML="${PARMgfs}/gdas/atmensanl_jedi_config.yaml.j2"
 export LGETKF_BKG_STAGING_YAML="${PARMgfs}/gdas/staging/atm_lgetkf_bkg.yaml.j2"
 
-export layout_x_atmensanl=@LAYOUT_X_ATMENSANL@
-export layout_y_atmensanl=@LAYOUT_Y_ATMENSANL@
+export layout_x_atmensanl="{{ LAYOUT_X_ATMENSANL }}"
+export layout_y_atmensanl="{{ LAYOUT_Y_ATMENSANL }}"
 
-export io_layout_x=@IO_LAYOUT_X@
-export io_layout_y=@IO_LAYOUT_Y@
+export io_layout_x="{{ IO_LAYOUT_X }}"
+export io_layout_y="{{ IO_LAYOUT_Y }}"
 
 echo "END: config.atmensanl"
-Original file line number
+Diff line change
@@ Expand Up / @@ -20,6 +20,7 @@ nohup.out @@
     exec/
     build*/
     install*/
+    venv/
     # Ignore fix directory symlinks
     #------------------------------
@@ Expand Down @@