Clean out non-gfs top level variables

.gitignore

@@ -30,7 +30,6 @@ fix/chem
 fix/cice
 fix/cpl
 fix/datm
-fix/gldas
 fix/gdas
 fix/gsi
 fix/lut

gempak/fix/gfs_meta

@@ -1,23 +1,23 @@
-$USHgempak/gfs_meta_us.sh 36 84 126 216
-$USHgempak/gfs_meta_bwx.sh 36 84 126 180
-$USHgempak/gfs_meta_comp.sh 36 84 126 
-$USHgempak/gfs_meta_ak.sh 36 84 132 216
-$USHgempak/gfs_meta_crb.sh 126 
-$USHgempak/gfs_meta_hur.sh 36 84 126 
-$USHgempak/gfs_meta_qpf.sh 36 84 132 216 
-$USHgempak/gfs_meta_precip.sh 36 84 132 216 384
-$USHgempak/gfs_meta_sa.sh 126  
-$USHgempak/gfs_meta_ver.sh 126  
-$USHgempak/gfs_meta_hi.sh 384
-$USHgempak/gfs_meta_nhsh.sh 384
-$USHgempak/gfs_meta_trop.sh 384
-$USHgempak/gfs_meta_usext.sh 384
-$USHgempak/gfs_meta_mar_ql.sh 24 48 96 180
-$USHgempak/gfs_meta_mar_comp.sh 126
-$USHgempak/gfs_meta_opc_na_ver 126
-$USHgempak/gfs_meta_opc_np_ver 126
-$USHgempak/gfs_meta_mar_atl.sh 180
-$USHgempak/gfs_meta_mar_pac.sh 180
-$USHgempak/gfs_meta_mar_ver.sh 48
-$USHgempak/gfs_meta_mar_skewt.sh 72
-$USHgempak/gfs_meta_sa2.sh 144
+${HOMEgfs}/gempak/ush/gfs_meta_us.sh 36 84 126 216
+${HOMEgfs}/gempak/ush/gfs_meta_bwx.sh 36 84 126 180
+${HOMEgfs}/gempak/ush/gfs_meta_comp.sh 36 84 126
+${HOMEgfs}/gempak/ush/gfs_meta_ak.sh 36 84 132 216
+${HOMEgfs}/gempak/ush/gfs_meta_crb.sh 126
+${HOMEgfs}/gempak/ush/gfs_meta_hur.sh 36 84 126
+${HOMEgfs}/gempak/ush/gfs_meta_qpf.sh 36 84 132 216
+${HOMEgfs}/gempak/ush/gfs_meta_precip.sh 36 84 132 216 384
+${HOMEgfs}/gempak/ush/gfs_meta_sa.sh 126
+${HOMEgfs}/gempak/ush/gfs_meta_ver.sh 126
+${HOMEgfs}/gempak/ush/gfs_meta_hi.sh 384
+${HOMEgfs}/gempak/ush/gfs_meta_nhsh.sh 384
+${HOMEgfs}/gempak/ush/gfs_meta_trop.sh 384
+${HOMEgfs}/gempak/ush/gfs_meta_usext.sh 384
+${HOMEgfs}/gempak/ush/gfs_meta_mar_ql.sh 24 48 96 180
+${HOMEgfs}/gempak/ush/gfs_meta_mar_comp.sh 126
+${HOMEgfs}/gempak/ush/gfs_meta_opc_na_ver 126
+${HOMEgfs}/gempak/ush/gfs_meta_opc_np_ver 126
+${HOMEgfs}/gempak/ush/gfs_meta_mar_atl.sh 180
+${HOMEgfs}/gempak/ush/gfs_meta_mar_pac.sh 180
+${HOMEgfs}/gempak/ush/gfs_meta_mar_ver.sh 48
+${HOMEgfs}/gempak/ush/gfs_meta_mar_skewt.sh 72
+${HOMEgfs}/gempak/ush/gfs_meta_sa2.sh 144

gempak/ush/gdas_meta_na.sh

@@ -51,7 +51,7 @@ PROJ    = str/90;-105;0
 LATLON  = 1
 
 
-restore $USHgempak/restore/pmsl_thkn.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/pmsl_thkn.2.nts
 CLRBAR  = 1
 HLSYM   = 2;1.5//21//hw
 TEXT    = 1/21//hw
@@ -60,7 +60,7 @@ l
 ru
 
 
-restore $USHgempak/restore/850mb_hght_tmpc.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/850mb_hght_tmpc.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 SKIP    = 0         !0         !0         !0         !/3
@@ -70,23 +70,23 @@ l
 ru
 
 
-restore $USHgempak/restore/700mb_hght_relh_omeg.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/700mb_hght_relh_omeg.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 5/-2/~ ? $m_title @ HGT, REL HUMIDITY AND OMEGA|~@ HGT, RH AND OMEGA!0
 l
 ru
 
 
-restore $USHgempak/restore/500mb_hght_absv.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/500mb_hght_absv.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 5/-2/~ ? $m_title @ HGT AND VORTICITY|~@ HGT AND VORTICITY!0
 l
 ru
 
 
-restore $USHgempak/restore/250mb_hght_wnd.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/250mb_hght_wnd.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 5/-2/~ ? $m_title @ HGT, ISOTACHS AND WIND (KTS)|~@ HGT AND WIND!0

gempak/ush/gfs_meta_hi.sh

@@ -45,9 +45,9 @@ MAP	= 1
 CLEAR	= yes
 CLRBAR  = 1
 
-restore ${USHgempak}/restore/garea_hi.nts
+restore ${HOMEgfs}/gempak/ush/restore/garea_hi.nts
 
-restore ${USHgempak}/restore/pmsl_thkn.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/pmsl_thkn.2.nts
 CLRBAR  = 1
 HLSYM   = 2;1.5//21//hw
 TEXT    = 1/21//hw
@@ -56,47 +56,47 @@ l
 ru
 
 
-restore ${USHgempak}/restore/850mb_hght_tmpc.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/850mb_hght_tmpc.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 5/-2/~ ? $m_title @ HGHTS, TEMPERATURE AND WIND (KTS)|~@ HGHT, TMP, WIND!0!0!0
 l
 ru
 
 
-restore ${USHgempak}/restore/700mb_hght_relh_omeg.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/700mb_hght_relh_omeg.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 5/-2/~ ? $m_title @ HGHTS, REL HUMIDITY AND OMEGA|~@ HGHT, RH AND OMEGA!0
 l
 ru
 
 
-restore ${USHgempak}/restore/500mb_hght_absv.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/500mb_hght_absv.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 5/-2/~ ? $m_title @ HEIGHTS AND VORTICITY|~@ HGHT AND VORTICITY!0
 l
 ru
 
 
-restore ${USHgempak}/restore/200mb_hght_wnd.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/200mb_hght_wnd.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 5/-2/~ ? $m_title @ HEIGHTS, ISOTACHS AND WIND (KTS)|~@ HGHT AND WIND!0
 l
 ru
 
 
-restore ${USHgempak}/restore/250mb_hght_wnd.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/250mb_hght_wnd.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 5/-2/~ ? $m_title @ HEIGHTS, ISOTACHS AND WIND (KTS)|~@ HGHT AND WIND!0
 l
 ru
 
 
-restore ${USHgempak}/restore/300mb_hght_wnd.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/300mb_hght_wnd.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 5/-2/~ ? $m_title @ HEIGHTS, ISOTACHS AND WIND (KTS)|~@ HGHT AND WIND!0
@@ -149,7 +149,7 @@ CLRBAR  = 1
 r
 
 
-restore ${USHgempak}/restore/precip.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/precip.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 GDATTIM = F12-F192-06; F214-F384-12

gempak/ush/gfs_meta_nhsh.sh

@@ -43,9 +43,9 @@ MAP	= 1
 CLEAR	= yes
 CLRBAR  = 1
 
-restore ${USHgempak}/restore/garea_nh.nts
+restore ${HOMEgfs}/gempak/ush/restore/garea_nh.nts
 
-restore ${USHgempak}/restore/500mb_hght_absv.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/500mb_hght_absv.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw 
 SKIP	= 0                  !0                  !1
@@ -65,18 +65,18 @@ l
 ru
 
 
-restore ${USHgempak}/restore/garea_sh.nts
+restore ${HOMEgfs}/gempak/ush/restore/garea_sh.nts
 
 DEVICE	= nc | Nmeta_sh
 TITLE	= 5//~ ? $m_title @ HEIGHTS AND VORTICITY|~ @ HGHT AND VORTICITY!0
 l
 ru
 
 
-restore ${USHgempak}/restore/garea_nh.nts
+restore ${HOMEgfs}/gempak/ush/restore/garea_nh.nts
 DEVICE	= nc | Nmeta_nh
 
-restore ${USHgempak}/restore/250mb_hght_wnd.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/250mb_hght_wnd.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 GDPFUN  = knts((mag(wnd)))            !sm9s(hght)
@@ -85,11 +85,11 @@ l
 ru
 
 
-restore ${USHgempak}/restore/garea_sh.nts
+restore ${HOMEgfs}/gempak/ush/restore/garea_sh.nts
 DEVICE	= nc | Nmeta_sh
 ru
 
-restore ${USHgempak}/restore/precip.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/precip.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 GDATTIM = F12-F240-12
@@ -99,7 +99,7 @@ TITLE   = 5//~ ? $m_title 12-HOUR TOTAL PRECIPITATION (IN)|~ 12-HOURLY TOTAL PCP
 l
 r
 
-restore ${USHgempak}/restore/garea_sh.nts
+restore ${HOMEgfs}/gempak/ush/restore/garea_sh.nts
 DEVICE	= nc | Nmeta_sh
 ru
 

gempak/ush/gfs_meta_us.sh

@@ -53,7 +53,7 @@ GAREA	= 17.529;-129.296;53.771;-22.374
 PROJ	= str/90;-105;0
 LATLON	= 0
 
-restore $USHgempak/restore/pmsl_thkn.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/pmsl_thkn.2.nts
 CLRBAR  = 1
 HLSYM   = 2;1.5//21//hw
 TEXT    = 1/21//hw
@@ -62,7 +62,7 @@ l
 run
 
 
-restore $USHgempak/restore/850mb_hght_tmpc.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/850mb_hght_tmpc.2.nts
 CLRBAR  = 1
 HLSYM   = 2;1.5//21//hw
 TEXT    = 1/21//hw
@@ -71,7 +71,7 @@ l
 run
 
 
-restore $USHgempak/restore/700mb_hght_relh_omeg.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/700mb_hght_relh_omeg.2.nts
 CLRBAR  = 1
 HLSYM   = 2;1.5//21//hw
 TEXT    = 1/21//hw
@@ -80,7 +80,7 @@ l
 run
 
 
-restore $USHgempak/restore/500mb_hght_absv.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/500mb_hght_absv.2.nts
 CLRBAR  = 1
 HLSYM   = 2;1.5//21//hw
 TEXT    = 1/21//hw
@@ -89,7 +89,7 @@ l
 run
 
 
-restore $USHgempak/restore/250mb_hght_wnd.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/250mb_hght_wnd.2.nts
 CLRBAR  = 1
 HLSYM   = 2;1.5//21//hw
 TEXT    = 1/21//hw
@@ -98,7 +98,7 @@ l
 run
 
 
-restore $USHgempak/restore/p06m_pmsl.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/p06m_pmsl.2.nts
 CLRBAR  = 1
 HLSYM   = 2;1.5//21//hw
 HLSYM   = 2;1.5//21//hw

gempak/ush/gfs_meta_usext.sh

@@ -71,43 +71,43 @@ GAREA	= 17.529;-129.296;53.771;-22.374
 PROJ	= str/90;-105;0
 LATLON	= 18/2
 
-restore ${USHgempak}/restore/pmsl_thkn.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/pmsl_thkn.2.nts
 CLRBAR  = 1
 HLSYM   = 2;1.5//21//hw
 TEXT    = 1/21//hw
 TITLE	= 1/-2/~ ? $m_title PMSL, 1000-500 MB THICKNESS|~MSLP, 1000-500 THKN!0
 l
 run
 
-restore ${USHgempak}/restore/850mb_hght_tmpc.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/850mb_hght_tmpc.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 1/-2/~ ? $m_title @ HGT, TEMPERATURE AND WIND (KTS)|~@ HGT, TMP, WIND!0
 l
 run
 
-restore ${USHgempak}/restore/700mb_hght_relh_omeg.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/700mb_hght_relh_omeg.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 1/-2/~ ? $m_title @ HGT, REL HUMIDITY AND OMEGA|~@ HGT, RH AND OMEGA!0
 l
 run
 
-restore ${USHgempak}/restore/500mb_hght_absv.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/500mb_hght_absv.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 1/-2/~ ? $m_title @ HGT AND VORTICITY|~@ HGT AND VORTICITY!0
 l
 run
 
-restore ${USHgempak}/restore/500mb_hght_gabsv.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/500mb_hght_gabsv.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 1/-2/~ ? $m_title @ HGT AND GEO ABS VORT|~@ HGT, GEO ABS VORT!0
 l
 run
 
-restore ${USHgempak}/restore/250mb_hght_wnd.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/250mb_hght_wnd.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 TITLE	= 1/-2/~ ? $m_title @ HGT, ISOTACHS AND WIND (KTS)|~@ HGT AND WIND!0
@@ -137,7 +137,7 @@ CLEAR   = YES
 l
 run
 
-restore ${USHgempak}/restore/precip.2.nts
+restore ${HOMEgfs}/gempak/ush/restore/precip.2.nts
 CLRBAR  = 1
 TEXT    = 1/21//hw
 HILO    = 31;0/x#2/.25-10///y

jobs/JGDAS_ATMOS_GEMPAK

@@ -5,16 +5,6 @@ source "${HOMEgfs}/ush/jjob_header.sh" -e "gempak" -c "base gempak"
 
 # TODO (#1219) This j-job is not part of the rocoto suite
 
-################################
-# Set up the HOME directory
-export EXECgfs=${EXECgfs:-${HOMEgfs}/exec}
-export PARMgfs=${PARMgfs:-${HOMEgfs}/parm}
-export PARMwmo=${PARMwmo:-${HOMEgfs}/parm/wmo}
-export PARMproduct=${PARMproduct:-${HOMEgfs}/parm/product}
-export USHgempak=${USHgempak:-${HOMEgfs}/gempak/ush}
-export SRCgfs=${SRCgfs:-${HOMEgfs}/scripts}
-export UTILgfs=${UTILgfs:-${HOMEgfs}/util}
-
 ############################################
 # Set up model and cycle specific variables
 ############################################
@@ -58,12 +48,12 @@ fi
 
 ########################################################
 # Execute the script.
-echo "${SRCgfs}/exgdas_atmos_nawips.sh gdas 009 GDAS_GEMPAK ${COM_ATMOS_GEMPAK_1p00}" >> poescript
+echo "${SCRgfs}/exgdas_atmos_nawips.sh gdas 009 GDAS_GEMPAK ${COM_ATMOS_GEMPAK_1p00}" >> poescript
 ########################################################
 
 ########################################################
 # Execute the script for quater-degree grib
-echo "${SRCgfs}/exgdas_atmos_nawips.sh gdas_0p25 009 GDAS_GEMPAK ${COM_ATMOS_GEMPAK_0p25}" >> poescript
+echo "${SCRgfs}/exgdas_atmos_nawips.sh gdas_0p25 009 GDAS_GEMPAK ${COM_ATMOS_GEMPAK_0p25}" >> poescript
 ########################################################
 
 cat poescript