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Merged
ajhenrique merged 14 commits into from
Jun 19, 2019
Merged

Esmf makefile #50

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ad9fee3
Branch esmf_makefile: Creating branch to update Makefile for NEMS bui…
ajhenrique May 9, 2019
6ec05d8
Branch esmf_makefile: Updating files
ajhenrique May 13, 2019
9d746f3
Branch esmf_makefile: Updating Makefile and temp compile script
ajhenrique May 15, 2019
bfda715
Branch esmf_makefile: modifications to support using intel option and…
ajhenrique May 16, 2019
29e930a
Branch esmf_makefile: changing to make work on theia.
ajhenrique May 16, 2019
d097665
Branch esmf_makefile: Changing Makefile to ensure compilation of ww3_…
ajhenrique May 16, 2019
cbcb0c6
Branch esmf_makefile: cleaning up
ajhenrique May 17, 2019
c5c960b
Branch esmf_makefile: removing temporary build script
ajhenrique May 21, 2019
94258cb
Branch esmf_makefile: removing temporary build script
ajhenrique May 21, 2019
326aae7
Branch esmf_makefile: Changing cmplr.env and w3_setup for use in NCEP…
ajhenrique May 28, 2019
7da4abb
Branch esmf_makefile: Adding comp/link files for wcoss_dell_p3
ajhenrique Jun 6, 2019
35c6b3c
Merge remote-tracking branch 'EMC/develop' into esmf_makefile
JessicaMeixner-NOAA Jun 14, 2019
ba318ee
esmf_makefile_nems: adding wcoss_dell_p3 to esmf/Makefile known options
JessicaMeixner-NOAA Jun 14, 2019
3a6c3a1
Merge pull request #1 from JessicaMeixner-NOAA/esmf_makefile_nems
ajhenrique Jun 14, 2019
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52 changes: 19 additions & 33 deletions model/bin/cmplr.env
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Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@
# #
# value : mpt / intel / gnu / pgi #
# suffix : _debug #
# prefix : zeus_ / datarmor_ #
# prefix : datarmor_ #
# #
# - examples : intel / pgi_debug / datarmor_mpt_debug #
# #
Expand All @@ -38,7 +38,6 @@ list='no'
###############################

if [ "$cmplr" == "mpt" ] || [ "$cmplr" == "mpt_debug" ] || \
[ "$cmplr" == "zeus_mpt" ] || [ "$cmplr" == "zeus_mpt_debug" ] || \
[ "$cmplr" == "datarmor_mpt" ] || [ "$cmplr" == "datarmor_mpt_debug" ] ; then

# COMPILER - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Expand All @@ -47,8 +46,8 @@ if [ "$cmplr" == "mpt" ] || [ "$cmplr" == "mpt_debug" ] || \
comp_seq='ifort'
comp_mpi='ifort -lmpi'

# zeus compiler
if [ ! -z "$(echo $cmplr | grep zeus)" ] ; then
# Cray compiler
if [ ! -z "$(echo $cmplr | grep wcoss_cray)" ] ; then
comp_seq='ftn'
comp_mpi='ftn'
fi
Expand Down Expand Up @@ -79,10 +78,7 @@ if [ "$cmplr" == "mpt" ] || [ "$cmplr" == "mpt_debug" ] || \
fi

# system-dependant options
if [ ! -z "$(echo $cmplr | grep zeus)" ] ; then
optc="$optc -fastsse"
optl="$optl -fastsse"
elif [ ! -z "$(echo $cmplr | grep datarmor)" ] ; then
if [ ! -z "$(echo $cmplr | grep datarmor)" ] ; then
optc="$optc -xcore-avx2"
optl="$optl -xcore-avx2"
else
Expand All @@ -98,7 +94,10 @@ fi
###############################

if [ "$cmplr" == "intel" ] || [ "$cmplr" == "intel_debug" ] || \
[ "$cmplr" == "zeus_intel" ] || [ "$cmplr" == "zeus_intel_debug" ] || \
[ "$cmplr" == "wcoss_phase2" ] || [ "$cmplr" == "wcoss_phase2_intel_debug" ] || \
[ "$cmplr" == "wcoss_cray" ] || [ "$cmplr" == "wcoss_cray_intel_debug" ] || \
[ "$cmplr" == "wcoss_dell_p3" ] || [ "$cmplr" == "wcoss_dell_p3_intel_debug" ] || \
[ "$cmplr" == "theia" ] || [ "$cmplr" == "theia_intel_debug" ] || \
[ "$cmplr" == "datarmor_intel" ] || [ "$cmplr" == "datarmor_intel_debug" ] ; then

# COMPILER - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Expand All @@ -107,8 +106,8 @@ if [ "$cmplr" == "intel" ] || [ "$cmplr" == "intel_debug" ] || \
comp_seq='ifort'
comp_mpi='mpiifort'

# zeus compiler
if [ ! -z "$(echo $cmplr | grep zeus)" ] ; then
# cray compiler
if [ ! -z "$(echo $cmplr | grep wcoss_cray)" ] ; then
comp_seq='ftn'
comp_mpi='ftn'
fi
Expand All @@ -117,7 +116,7 @@ if [ "$cmplr" == "intel" ] || [ "$cmplr" == "intel_debug" ] || \
# OPTIONS - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

# common options
optc='-c -module $path_m -no-fma -ip -p -g -i4 -real-size 32 -fp-model precise -assume byterecl -convert big_endian -fno-alias -fno-fnalias'
optc='-c -module $path_m -no-fma -fPIC -ip -p -g -i4 -real-size 32 -fp-model precise -assume byterecl -convert big_endian -fno-alias -fno-fnalias'
optl='-o $prog -p -g'

# list options
Expand All @@ -139,10 +138,7 @@ if [ "$cmplr" == "intel" ] || [ "$cmplr" == "intel_debug" ] || \
fi

# system-dependant options
if [ ! -z "$(echo $cmplr | grep zeus)" ] ; then
optc="$optc -fastsse"
optl="$optl -fastsse"
elif [ ! -z "$(echo $cmplr | grep datarmor)" ] ; then
if [ ! -z "$(echo $cmplr | grep datarmor)" ] ; then
optc="$optc -xcore-avx2"
optl="$optl -xcore-avx2"
else
Expand All @@ -153,14 +149,11 @@ if [ "$cmplr" == "intel" ] || [ "$cmplr" == "intel_debug" ] || \
fi




###############################
# GNU #
###############################

if [ "$cmplr" == "gnu" ] || [ "$cmplr" == "gnu_debug" ] || \
[ "$cmplr" == "zeus_gnu" ] || [ "$cmplr" == "zeus_gnu_debug" ] || \
[ "$cmplr" == "datarmor_gnu" ] || [ "$cmplr" == "datarmor_gnu_debug" ] ; then

# COMPILER - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Expand All @@ -169,8 +162,8 @@ if [ "$cmplr" == "gnu" ] || [ "$cmplr" == "gnu_debug" ] || \
comp_seq='gfortran'
comp_mpi='mpif90'

# zeus compiler
if [ ! -z "$(echo $cmplr | grep zeus)" ] ; then
# Cray compiler
if [ ! -z "$(echo $cmplr | grep wcoss_cray)" ] ; then
comp_seq='ftn'
comp_mpi='ftn'
fi
Expand All @@ -179,7 +172,7 @@ if [ "$cmplr" == "gnu" ] || [ "$cmplr" == "gnu_debug" ] || \
# OPTIONS - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

# common options
optc='-c -J$path_m -p -g -fno-second-underscore -ffree-line-length-none -fconvert=big-endian'
optc='-c -J$path_m -p -fPIC -g -fno-second-underscore -ffree-line-length-none -fconvert=big-endian'
optl='-o $prog -p -g'

# omp options
Expand All @@ -198,10 +191,7 @@ if [ "$cmplr" == "gnu" ] || [ "$cmplr" == "gnu_debug" ] || \
fi

# system-dependant options
if [ ! -z "$(echo $cmplr | grep zeus)" ] ; then
optc="$optc -fastsse"
optl="$optl -fastsse"
elif [ ! -z "$(echo $cmplr | grep datarmor)" ] ; then
if [ ! -z "$(echo $cmplr | grep datarmor)" ] ; then
optc="$optc -march=core-avx2"
optl="$optl -march=core-avx2"
else
Expand All @@ -219,7 +209,6 @@ fi
###############################

if [ "$cmplr" == "pgi" ] || [ "$cmplr" == "pgi_debug" ] || \
[ "$cmplr" == "zeus_pgi" ] || [ "$cmplr" == "zeus_pgi_debug" ] || \
[ "$cmplr" == "datarmor_pgi" ] || [ "$cmplr" == "datarmor_pgi_debug" ] ; then

# COMPILER - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Expand All @@ -228,8 +217,8 @@ if [ "$cmplr" == "pgi" ] || [ "$cmplr" == "pgi_debug" ] || \
comp_seq='pgf90'
comp_mpi='mpif90'

# zeus compiler
if [ ! -z "$(echo $cmplr | grep zeus)" ] ; then
# Cray compiler
if [ ! -z "$(echo $cmplr | grep wcoss_cray)" ] ; then
comp_seq='ftn'
comp_mpi='ftn'
fi
Expand Down Expand Up @@ -260,10 +249,7 @@ if [ "$cmplr" == "pgi" ] || [ "$cmplr" == "pgi_debug" ] || \
fi

# system-dependant options
if [ ! -z "$(echo $cmplr | grep zeus)" ] ; then
optc="$optc -fastsse"
optl="$optl -fastsse"
elif [ ! -z "$(echo $cmplr | grep datarmor)" ] ; then
if [ ! -z "$(echo $cmplr | grep datarmor)" ] ; then
optc="$(echo $optc | sed 's/O3/O2/') -Mlist"
optl="$optl"
else
Expand Down
211 changes: 211 additions & 0 deletions model/bin/comp.wcoss_dell_p3
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Original file line number Diff line number Diff line change
@@ -0,0 +1,211 @@
#!/bin/bash
# --------------------------------------------------------------------------- #
# comp : Compiler script for use in ad3 (customized for hardware and #
# optimization). Note that this script will not be replaced if part #
# of WAVEWATCH III is re-installed. Used by ad3. #
# #
# use : comp name #
# name: name of source code file without the extension. #
# #
# error codes : 1 : input error #
# 2 : no environment file $ww3_env found. #
# 3 : error in creating scratch directory. #
# 4 : w3adc error. #
# 5 : compiler error. #
# #
# remarks : #
# #
# - This script runs from the scratch directory, where it should remain. #
# #
# - For this script to interact with ad3, it needs to generate / leave #
# following files : #
# $name.f90 : Source code (generated by ad3). #
# $name.o : Object module. #
# $name.l : Listing file. #
# comp.stat.$name : status file of compiler, containing number of errors #
# and number of warnings (generated by comp). #
# #
# - Upon (first) installation of WAVEWATCH III the user needs to check the #
# following parts of this script : #
# sec. 2.b : Provide correct compiler/options. #
# sec. 3.a : Provide correct error capturing. #
# sec. 3.d : Remove unnecessary files. #
# #
# - This version is made for the Intel ifort version 12 on Xeon Westmere #
# - On zeus the -list option slows down the compilation time by an order #
# of magnitude. For this section 1.c is added. #
# #
# Hendrik L. Tolman #
# June 2012 #
# --------------------------------------------------------------------------- #
# 1. Preparations #
# --------------------------------------------------------------------------- #
# 1.a Check and process input

if [ "$#" != '1' ]
then
echo "usage: comp name" ; exit 1
fi
name="$1"

# 1.b Initial clean-up - - - - - - - - - - - - - - - - - - - - - - - - - - - -

rm -f $name.l
rm -f $name.o
rm -f comp.stat.$name

# 1.c Set listing option - - - - - - - - - - - - - - - - - - - - - - - - - - -

list=' -list'
list=

# --------------------------------------------------------------------------- #
# 2. Compile #
# --------------------------------------------------------------------------- #
# Add here the correct compiler call including command line options
# Note: - do not invoke a link step
# - if possible, generate a listing $name.l
# - make sure the compiler point to the proper directory where the
# modules are stored ($m_path), see examples below.

# 2.a Determine file extension - - - - - - - - - - - - - - - - - - - - - - - -
# .f90 assumes free format, .f assumes fixed format, change if necessary
# *** file extension (fext) is set and exported by calling program (ad3) ***

# 2.b Perform compilation - - - - - - - - - - - - - - - - - - - - - - - - - -
# Save compiler exit code in $OK
#
# Intel compiler on Linux ----------------------------------------------------
# 2.b.1 Build options and determine compiler name

opt="-c $list -O3 -assume byterecl -ip -module $path_m"
# opt="-c $list -O3 -assume byterecl -xSSE4.2 -ip -module $path_m"
# opt="-c $list -O3 -assume byterecl -prec-div -prec-sqrt -xHost -align array128byte -ip -module $path_m"
# opt="-c $list -O0 -assume byterecl -g -traceback -check all -fpe0 -ftrapuv -module $path_m"

if [ "$name" != 'ww3_gspl' ]
then
opt="$opt -convert big_endian"
fi

# mpi implementation
if [ "$mpi_mod" = 'yes' ]
then
comp=mpiifort
which mpiifort 1> /dev/null 2> /dev/null
OK=$?
if [ $OK != 0 ]
then
comp=ifort
fi

else
comp=ifort
fi

# open mpi implementation
if [ "$omp_mod" = 'yes' ]
then
opt="$opt -qopenmp"
fi

# oasis coupler include dir
if [ "$oasis_mod" = 'yes' ]
then
opt="$opt -I$OASISDIR/build/lib/psmile.MPI1"
fi

# netcdf include dir
if [ "$netcdf_compile" = 'yes' ]
then
case $WWATCH3_NETCDF in
NC3) opt="$opt -I$NETCDF_INCDIR" ;;
NC4) if [ "$mpi_mod" = 'no' ]; then comp="`$NETCDF_CONFIG --fc`"; fi
opt="$opt -I`$NETCDF_CONFIG --includedir`" ;;
esac
fi

# ftn include dir
opt="$opt -I$path_i"
opt="$opt $ESMF_F90COMPILEPATHS"
opt="$opt $EXTRA_COMP_OPTIONS"

# 2.b.2 Compile

$comp $opt $name.$fext > $name.out 2> $name.err
OK="$?"

# 2.b.2 Process listing

if [ -s $name.lst ]
then
mv $name.lst $name.l
fi

# 2.b.3 Add test output to listing for later viewing

if [ -s $name.l ]
then
echo '------------' >> $name.l
echo "$comp $opt" >> $name.l
echo '------------' >> $name.l
cat $name.out >> $name.l 2> /dev/null
echo '------------' >> $name.l
cat $name.err >> $name.l 2> /dev/null
echo '------------' >> $name.l
fi

# --------------------------------------------------------------------------- #
# 3. Postprocessing #
# --------------------------------------------------------------------------- #
# 3.a Capture errors
# nr_err : number of errors.
# nr_war : number of errors.

nr_err='0'
nr_war='0'

if [ -s $name.err ]
then
nr_err=`grep 'error' $name.err | wc -l | awk '{ print $1 }'`
nr_war=`grep 'warning' $name.err | wc -l | awk '{ print $1 }'`
else
if [ "$OK" != '0' ]
then
nr_err='1'
fi
fi

# 3.b Make file comp.stat.$name - - - - - - - - - - - - - - - - - - - - - - - - - -

echo "ERROR $nr_err" > comp.stat.$name
echo "WARNING $nr_war" >> comp.stat.$name

# 3.c Prepare listing - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# if compiler does not provide listing, make listing from source code
# and compiler messages. Second input line for w3list identifies if
# comment lines are to be numbered.

if [ ! -f $name.l ]
then
echo "$name.$fext" > w3list.inp
echo "T" >> w3list.inp
w3list < w3list.inp 2> /dev/null
rm -f w3list.inp
mv w3list.out $name.l
echo '------------' >> $name.l
echo "$comp $opt" >> $name.l
echo '------------' >> $name.l
cat $name.out >> $name.l #2> /dev/null
echo '------------' >> $name.l
cat $name.err >> $name.l #2> /dev/null
echo '------------' >> $name.l
fi

# 3.d Remove unwanted files - - - - - - - - - - - - - - - - - - - - - - - - -
# include here unwanted files generated by the compiler

# rm -f $name.out
# rm -f $name.err

# end of comp --------------------------------------------------------------- #
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