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Merged
WenMeng-NOAA merged 8 commits into from
Feb 2, 2022
Merged

Port UPP develop branch on wcoss2 #439

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68c691d
Add changes for WCOSS2 Acorn.
WenMeng-NOAA Oct 25, 2021
e321009
Merge remote-tracking branch 'upstream/develop' into post_develop_wcoss2
WenMeng-NOAA Dec 31, 2021
e71681d
Add changes for Dogwood.
WenMeng-NOAA Jan 18, 2022
e7572ec
Merge remote-tracking branch 'upstream/develop' into
WenMeng-NOAA Jan 18, 2022
9a69e12
Merge remote-tracking branch 'upstream/develop' into post_develop_wcoss2
WenMeng-NOAA Jan 19, 2022
ec2be2a
Add changes for WCOSS2.
WenMeng-NOAA Jan 19, 2022
2dd8482
Change modulefile on wcoss2 in LUA format based on Kate's comments.
WenMeng-NOAA Jan 24, 2022
503d561
Add machine recognition for cactus and WCOSS1 P3.5 based on Eric's co…
WenMeng-NOAA Feb 2, 2022
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14 changes: 3 additions & 11 deletions jobs/JGLOBAL_ATMOS_NCEPPOST
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Original file line number Diff line number Diff line change
Expand Up @@ -65,9 +65,6 @@ export g2tmpl_ver=${g2tmpl_ver:-v1.5.0}
export CDATE=${CDATE:-${PDY}${cyc}}
export CDUMP=${CDUMP:-${RUN:-"gfs"}}
export COMPONENT=${COMPONENT:-atmos}
if [ $RUN_ENVIR = "nco" ]; then
export ROTDIR=${COMROOT:?}/$NET/$envir
fi


##############################################
Expand All @@ -77,17 +74,12 @@ export APRUNP=${APRUN:-$APRUN_NP}
export RERUN=${RERUN:-NO}
export HOMECRTM=${HOMECRTM:-${NWROOT}/lib/crtm/${crtm_ver}}
export FIXCRTM=${CRTM_FIX:-${HOMECRTM}/fix}
#export FIXCRTM=${FIXCRTM:-${NWROOThps}/hwrf.${hwrf_ver}/fix/hwrf-crtm-2.0.6}
export PARMpost=${PARMpost:-$HOMEgfs/parm/post}
export INLINE_POST=${WRITE_DOPOST:-".false."}

if [ $RUN_ENVIR = "nco" ]; then
export COMIN=${COMIN:-$ROTDIR/$RUN.$PDY/$cyc/$COMPONENT}
export COMOUT=${COMOUT:-$ROTDIR/$RUN.$PDY/$cyc/$COMPONENT}
else
export COMIN="$ROTDIR/$CDUMP.$PDY/$cyc/$COMPONENT"
export COMOUT="$ROTDIR/$CDUMP.$PDY/$cyc/$COMPONENT"
fi
export COMIN=${COMIN:-$ROTDIR/$RUN.$PDY/$cyc/$COMPONENT}
export COMOUT=${COMOUT:-$ROTDIR/$RUN.$PDY/$cyc/$COMPONENT}

[[ ! -d $COMOUT ]] && mkdir -m 775 -p $COMOUT

if [ $RUN = gfs ];then
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2 changes: 1 addition & 1 deletion jobs/JGLOBAL_ATMOS_POST_MANAGER
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Expand Up @@ -89,7 +89,7 @@ export EXT_FCST=NO
###########################################
export cycle=t${cyc}z
setpdy.sh
. PDY
. ./PDY

export ROTDIR=${ROTDIR:-${COMROOT:?}/$NET/$envir}
export COMIN=${COMIN:-$ROTDIR/$RUN.$PDY/$cyc/$COMPONENT}
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39 changes: 39 additions & 0 deletions modulefiles/wcoss2
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@@ -0,0 +1,39 @@
#%Module######################################################################
# Wen Meng 01/2021, Set up config. with the hpc-stack NCEPLIBS.
##############################################################################

proc ModulesHelp { } {
puts stderr "Loads modules required for building upp"
}
module-whatis "Loads UPP prerequisites on WCOSS2"

module load PrgEnv-intel/8.1.0
module load intel/19.1.3.304
module load craype/2.7.8
module load cray-mpich/8.1.7

module load cmake/3.20.2

module load jasper/2.0.25
module load zlib/1.2.11
module load libpng/1.6.37

module load hdf5/1.10.6
module load netcdf/4.7.4

module load bacio/2.4.1
module load crtm/2.3.0
module load g2/3.4.4
module load g2tmpl/1.10.0
module load ip/3.3.3
module load nemsio/2.5.2
module load sfcio/1.4.1
module load sigio/2.3.2
module load sp/2.3.3
module load w3nco/2.4.1
module load w3emc/2.7.3
module load wrf_io/1.2.0

setenv CC cc
setenv CXX CC
setenv FC ftn
6 changes: 5 additions & 1 deletion tests/compile_upp.sh
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Expand Up @@ -54,7 +54,11 @@ PATHTR=${PATHTR:-$( cd ${MYDIR}/.. && pwd )}

#Load required modulefiles
if [[ $MACHINE_ID != "unknown" ]]; then
module purge
if [[ $MACHINE_ID == "wcoss2" ]]; then
module reset
else
module purge
fi
module use $PATHTR/modulefiles
modulefile=${MACHINE_ID}
module load $modulefile
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15 changes: 13 additions & 2 deletions tests/detect_machine.sh
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Expand Up @@ -24,8 +24,19 @@ case $(hostname -f) in
m72a2.ncep.noaa.gov) MACHINE_ID=wcoss_dell_p3 ;; ### mars
m72a3.ncep.noaa.gov) MACHINE_ID=wcoss_dell_p3 ;; ### mars

alogin01) MACHINE_ID=wcoss2 ;; ### acorn
alogin02) MACHINE_ID=wcoss2 ;; ### acorn
alogin01.acorn.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2_a ;; ### acorn
alogin02.acorn.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2_a ;; ### acorn
adecflow01.acorn.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2 ;; ### acorn
adecflow02.acorn.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2 ;; ### acorn
dlogin01.dogwood.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2 ;; ### dogwood
dlogin02.dogwood.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2 ;; ### dogwood
dlogin03.dogwood.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2 ;; ### dogwood
dlogin04.dogwood.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2 ;; ### dogwood
dlogin05.dogwood.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2 ;; ### dogwood
dlogin06.dogwood.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2 ;; ### dogwood
dlogin07.dogwood.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2 ;; ### dogwood
dlogin08.dogwood.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2 ;; ### dogwood
dlogin09.dogwood.wcoss2.ncep.noaa.gov) MACHINE_ID=wcoss2 ;; ### dogwood

gaea9) MACHINE_ID=gaea ;; ### gaea9
gaea10) MACHINE_ID=gaea ;; ### gaea10
Expand Down