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release/public-v1: update README for hera and jet #67

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climbfuji merged 1 commit into from
Aug 28, 2020
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release/public-v1: update README for hera and jet #67

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17 changes: 4 additions & 13 deletions doc/README_hera_intel.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -3,31 +3,23 @@ Setup instructions for NOAA RDHPC Hera using Intel-18.0.5.274
module purge
module load intel/18.0.5.274
module load impi/2018.0.4
module load netcdf/4.7.0
module load cmake/3.16.1
module li

> Currently Loaded Modules:
> 1) intel/18.0.5.274 2) impi/2018.0.4 3) netcdf/4.7.0 4) cmake/3.16.1

# Note: HDF5 is in: /apps/hdf5/1.10.5/intel/18.0.5.274
# Note: ZLIB and PNG are in: /usr/include, /usr/lib64/
> 1) intel/18.0.5.274 2) impi/2018.0.4 3) cmake/3.16.1

export CC=icc
export CXX=icpc
export FC=ifort

export HDF5_ROOT=/apps/hdf5/1.10.5/intel/18.0.5.274
export PNG_ROOT=/usr

mkdir -p /scratch1/BMC/gmtb/software/NCEPLIBS-ufs-v1.1.0/intel-18.0.5.274/impi-2018.0.4/src
cd /scratch1/BMC/gmtb/software/NCEPLIBS-ufs-v1.1.0/intel-18.0.5.274/impi-2018.0.4/src

git clone -b ufs-v1.1.0 --recursive https://github.com/NOAA-EMC/NCEPLIBS-external
cd NCEPLIBS-external
mkdir build && cd build
# If netCDF is not built, also don't build PNG, because netCDF uses the default (OS) zlib in the search path
cmake -DBUILD_PNG=OFF -DBUILD_MPI=OFF -DBUILD_NETCDF=OFF -DCMAKE_INSTALL_PREFIX=/scratch1/BMC/gmtb/software/NCEPLIBS-ufs-v1.1.0/intel-18.0.5.274/impi-2018.0.4 .. 2>&1 | tee log.cmake
cmake -DBUILD_MPI=OFF -DCMAKE_INSTALL_PREFIX=/scratch1/BMC/gmtb/software/NCEPLIBS-ufs-v1.1.0/intel-18.0.5.274/impi-2018.0.4 .. 2>&1 | tee log.cmake
make VERBOSE=1 -j8 2>&1 | tee log.make

cd /scratch1/BMC/gmtb/software/NCEPLIBS-ufs-v1.1.0/intel-18.0.5.274/impi-2018.0.4/src
Expand All @@ -36,7 +28,7 @@ cd NCEPLIBS
mkdir build && cd build
cmake -DEXTERNAL_LIBS_DIR=/scratch1/BMC/gmtb/software/NCEPLIBS-ufs-v1.1.0/intel-18.0.5.274/impi-2018.0.4 -DCMAKE_INSTALL_PREFIX=/scratch1/BMC/gmtb/software/NCEPLIBS-ufs-v1.1.0/intel-18.0.5.274/impi-2018.0.4 .. 2>&1 | tee log.cmake
make VERBOSE=1 -j8 2>&1 | tee log.make
make install
make install 2>&1 | tee log.install


- END OF THE SETUP INSTRUCTIONS -
Expand All @@ -56,15 +48,14 @@ the following commands should suffice to build the model.
module purge
module load intel/18.0.5.274
module load impi/2018.0.4
module load netcdf/4.7.0
module load cmake/3.16.1

export CC=icc
export CXX=icpc
export FC=ifort

module use -a /scratch1/BMC/gmtb/software/modulefiles/intel-18.0.5.274/impi-2018.0.4
module load NCEPlibs/1.1.0
module load NCEPlibs/1.1.0

export CMAKE_Platform=hera.intel
./build.sh 2>&1 | tee build.log
15 changes: 3 additions & 12 deletions doc/README_jet_intel.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -3,31 +3,23 @@ Setup instructions for NOAA RDHPC Jet using Intel-18.0.5.274
module purge
module load intel/18.0.5.274
module load impi/2018.4.274
module load netcdf/4.7.0
module load cmake/3.16.1
module li

> Currently Loaded Modules:
> 1) intel/18.0.5.274 2) impi/2018.4.274 3) netcdf/4.7.0 4) cmake/3.16.1
> 1) intel/18.0.5.274 2) impi/2018.4.274 3) cmake/3.16.1

export CC=icc
export FC=ifort
export CXX=icpc

# HDF5 is in: /apps/hdf5/1.10.5/intel/18.0.5.274
# ZLIB and PNG are in: /usr/include, /usr/lib64

export HDF5_ROOT=/apps/hdf5/1.10.5/intel/18.0.5.274
export PNG_ROOT=/usr

mkdir -p /lfs4/HFIP/hfv3gfs/software/NCEPlibs-ufs-v1.1.0/intel-18.0.5.274/impi-2018.4.274/src
cd /lfs4/HFIP/hfv3gfs/software/NCEPlibs-ufs-v1.1.0/intel-18.0.5.274/impi-2018.4.274/src

git clone -b ufs-v1.1.0 --recursive https://github.com/NOAA-EMC/NCEPLIBS-external
cd NCEPLIBS-external
mkdir build && cd build
# If netCDF is not built, also don't build PNG, because netCDF uses the default (OS) zlib in the search path
cmake -DBUILD_PNG=OFF -DBUILD_MPI=OFF -DBUILD_NETCDF=OFF -DCMAKE_INSTALL_PREFIX=/lfs4/HFIP/hfv3gfs/software/NCEPlibs-ufs-v1.1.0/intel-18.0.5.274/impi-2018.4.274 .. 2>&1 | tee log.cmake
cmake -DBUILD_MPI=OFF -DCMAKE_INSTALL_PREFIX=/lfs4/HFIP/hfv3gfs/software/NCEPlibs-ufs-v1.1.0/intel-18.0.5.274/impi-2018.4.274 .. 2>&1 | tee log.cmake
make VERBOSE=1 -j8 2>&1 | tee log.make

cd /lfs4/HFIP/hfv3gfs/software/NCEPlibs-ufs-v1.1.0/intel-18.0.5.274/impi-2018.4.274/src
Expand All @@ -36,7 +28,7 @@ cd NCEPLIBS
mkdir build && cd build
cmake -DEXTERNAL_LIBS_DIR=/lfs4/HFIP/hfv3gfs/software/NCEPlibs-ufs-v1.1.0/intel-18.0.5.274/impi-2018.4.274 -DCMAKE_INSTALL_PREFIX=/lfs4/HFIP/hfv3gfs/software/NCEPlibs-ufs-v1.1.0/intel-18.0.5.274/impi-2018.4.274 .. 2>&1 | tee log.cmake
make VERBOSE=1 -j8 2>&1 | tee log.make
make install
make install 2>&1 | tee log.install


- END OF THE SETUP INSTRUCTIONS -
Expand All @@ -56,7 +48,6 @@ the following commands should suffice to build the model.
module purge
module load intel/18.0.5.274
module load impi/2018.4.274
module load netcdf/4.7.0
module load cmake/3.16.1

export CC=icc
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