NOAA-EMC · RussTreadon-NOAA · Jul 9, 2025 · Jun 3, 2025 · Jun 3, 2025 · Jun 4, 2025
diff --git a/ci/spack_gcc.yaml b/ci/spack_gcc.yaml
@@ -11,13 +11,12 @@ spack:
   specs:
   - netcdf-c@4.9.2
   - netcdf-fortran@4.6.1
-  - bufr@11.7.0
+  - bufr@12.1.0
   - bacio@2.4.1
   - w3emc@2.10.0
-  - sp@2.5.0
-  - ip@4.3.0
-  - sigio@2.3.2
-  - sfcio@1.4.1
+  - ip@5.1.0
+  - sigio@2.3.3
+  - sfcio@1.4.2
   - nemsio@2.5.4
   - wrf-io@1.2.0
   - ncio@1.1.2

diff --git a/ci/spack_intel.yaml b/ci/spack_intel.yaml
@@ -9,13 +9,12 @@ spack:
   specs:
   - netcdf-c@4.9.2 ~blosc build_system=cmake
   - netcdf-fortran@4.6.1
-  - bufr@11.7.0
+  - bufr@12.1.0
   - bacio@2.4.1
   - w3emc@2.10.0
-  - sp@2.5.0
-  - ip@4.3.0
-  - sigio@2.3.2
-  - sfcio@1.4.1
+  - ip@5.1.0
+  - sigio@2.3.3
+  - sfcio@1.4.2
   - nemsio@2.5.4
   - wrf-io@1.2.0
   - ncio@1.1.2

diff --git a/modulefiles/gsi_acorn.intel.lua b/modulefiles/gsi_acorn.intel.lua
@@ -13,8 +13,7 @@ local netcdf_ver=os.getenv("netcdf_ver") or "4.7.4"
 local bufr_ver=os.getenv("bufr_ver") or "12.1.0"
 local bacio_ver=os.getenv("bacio_ver") or "2.4.1"
 local w3emc_ver=os.getenv("w3emc_ver") or "2.9.2"
-local sp_ver=os.getenv("sp_ver") or "2.3.3"
-local ip_ver=os.getenv("ip_ver") or "3.3.3"
+local ip_ver=os.getenv("ip_ver") or "5.1.0"
 local sigio_ver=os.getenv("sigio_ver") or "2.3.2"
 local sfcio_ver=os.getenv("sfcio_ver") or "1.4.1"
 local nemsio_ver=os.getenv("nemsio_ver") or "2.5.4"
@@ -23,7 +22,6 @@ local ncio_ver=os.getenv("ncio_ver") or "1.1.2"
 local crtm_ver=os.getenv("crtm_ver") or "2.4.0.1"
 local ncdiag_ver=os.getenv("ncdiag_ver") or "1.1.1"
 
-load(pathJoin("envvar", "1.0"))
 load(pathJoin("PrgEnv-intel", PrgEnv_intel_ver))
 load(pathJoin("intel", intel_ver))
 load(pathJoin("craype", craype_ver))
@@ -37,13 +35,22 @@ load(pathJoin("netcdf", netcdf_ver))
 load(pathJoin("bufr", bufr_ver))
 load(pathJoin("bacio", bacio_ver))
 load(pathJoin("w3emc", w3emc_ver))
-load(pathJoin("sp", sp_ver))
-load(pathJoin("ip", ip_ver))
+--load(pathJoin("ip", ip_ver))
+-- Temporarily define IP's paths here.
+-- TODO when testing is complete, request an official installation in https://github.com/NOAA-EMC/WCOSS2-requests/issues/11
+pushenv("ip_ROOT", pathJoin("/lfs/h2/emc/nceplibs/noscrub/hpc-stack/libs/hpc-stack/intel-19.1.3.304/ip", ip_ver))
+pushenv("IP_INC4", pathJoin("/lfs/h2/emc/nceplibs/noscrub/hpc-stack/libs/hpc-stack/intel-19.1.3.304/ip", ip_ver, "include_4"))
+pushenv("IP_INCd", pathJoin("/lfs/h2/emc/nceplibs/noscrub/hpc-stack/libs/hpc-stack/intel-19.1.3.304/ip", ip_ver, "include_d"))
+pushenv("IP_LIB4", pathJoin("/lfs/h2/emc/nceplibs/noscrub/hpc-stack/libs/hpc-stack/intel-19.1.3.304/ip", ip_ver, "lib64/libip_4.a"))
+pushenv("IP_LIBd", pathJoin("/lfs/h2/emc/nceplibs/noscrub/hpc-stack/libs/hpc-stack/intel-19.1.3.304/ip", ip_ver, "lib64/libip_d.a"))
+pushenv("ip_VERSION", ip_ver)
+
 load(pathJoin("sigio", sigio_ver))
 load(pathJoin("sfcio", sfcio_ver))
 load(pathJoin("nemsio", nemsio_ver))
 load(pathJoin("wrf_io", wrf_io_ver))
 load(pathJoin("ncio", ncio_ver))
+--load(pathJoin("crtm", crtm_ver))
 load(pathJoin("ncdiag",ncdiag_ver))
 
 -- Lastly, load CRTM from the EMC location

diff --git a/modulefiles/gsi_common.lua b/modulefiles/gsi_common.lua
@@ -5,31 +5,31 @@ Load common modules to build GSI on all machines
 local netcdf_c_ver=os.getenv("netcdf_c_ver") or "4.9.2"
 local netcdf_fortran_ver=os.getenv("netcdf_fortran_ver") or "4.6.1"
 
-local bufr_ver=os.getenv("bufr_ver") or "11.7.0"
+local bufr_ver=os.getenv("bufr_ver") or "12.1.0"
 local bacio_ver=os.getenv("bacio_ver") or "2.4.1"
 local w3emc_ver=os.getenv("w3emc_ver") or "2.10.0"
-local sp_ver=os.getenv("sp_ver") or "2.5.0"
-local ip_ver=os.getenv("ip_ver") or "4.3.0"
-local sigio_ver=os.getenv("sigio_ver") or "2.3.2"
-local sfcio_ver=os.getenv("sfcio_ver") or "1.4.1"
+local ip_ver=os.getenv("ip_ver") or "5.1.0"
+local sigio_ver=os.getenv("sigio_ver") or "2.3.3"
+local sfcio_ver=os.getenv("sfcio_ver") or "1.4.2"
 local nemsio_ver=os.getenv("nemsio_ver") or "2.5.4"
 local wrf_io_ver=os.getenv("wrf_io_ver") or "1.2.0"
 local ncio_ver=os.getenv("ncio_ver") or "1.1.2"
 local crtm_ver=os.getenv("crtm_ver") or "2.4.0.1"
 local ncdiag_ver=os.getenv("ncdiag_ver") or "1.1.2"
+local prod_util_ver=os.getenv("prod_util_ver") or "2.1.1"
 
 load(pathJoin("netcdf-c", netcdf_c_ver))
 load(pathJoin("netcdf-fortran", netcdf_fortran_ver))
 
 load(pathJoin("bufr", bufr_ver))
 load(pathJoin("bacio", bacio_ver))
 load(pathJoin("w3emc", w3emc_ver))
-load(pathJoin("sp", sp_ver))
 load(pathJoin("ip", ip_ver))
 load(pathJoin("sigio", sigio_ver))
 load(pathJoin("sfcio", sfcio_ver))
 load(pathJoin("nemsio", nemsio_ver))
 load(pathJoin("wrf-io", wrf_io_ver))
 load(pathJoin("ncio", ncio_ver))
 load(pathJoin("crtm", crtm_ver))
-load(pathJoin("gsi-ncdiag",ncdiag_ver))
+load(pathJoin("gsi-ncdiag", ncdiag_ver))
+load(pathJoin("prod_util", prod_util_ver))
diff --git a/modulefiles/gsi_discover.intel b/modulefiles/gsi_discover.intel
diff --git a/modulefiles/gsi_gaeac5.intel.lua b/modulefiles/gsi_gaeac5.intel.lua
diff --git a/modulefiles/gsi_gaeac6.intel.lua b/modulefiles/gsi_gaeac6.intel.lua
@@ -1,22 +1,19 @@
 help([[
 ]])
 
---prepend_path("MODULEPATH", "/ncrc/proj/epic/spack-stack/spack-stack-1.6.0/envs/gsi-addon-dev/install/modulefiles/Core")
-prepend_path("MODULEPATH", "/ncrc/proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/gsi-addon/install/modulefiles/Core")
+prepend_path("MODULEPATH", "/ncrc/proj/epic/spack-stack/c6/spack-stack-1.9.2/envs/ue-intel-2023.2.0/install/modulefiles/Core")
 
-local stack_python_ver=os.getenv("stack_python_ver") or "3.11.6"
+local stack_python_ver=os.getenv("stack_python_ver") or "3.11.7"
 local stack_intel_ver=os.getenv("stack_intel_ver") or "2023.2.0"
-local stack_cray_mpich_ver=os.getenv("stack_cray_mpich_ver") or "8.1.29"
-local cmake_ver=os.getenv("cmake_ver") or "3.23.1"
-local prod_util_ver=os.getenv("prod_util_ver") or "2.1.1"
+local stack_cray_mpich_ver=os.getenv("stack_cray_mpich_ver") or "8.1.30"
+local cmake_ver=os.getenv("cmake_ver") or "3.27.9"
 
 load(pathJoin("stack-intel", stack_intel_ver))
 load(pathJoin("stack-cray-mpich", stack_cray_mpich_ver))
 load(pathJoin("stack-python", stack_python_ver))
 load(pathJoin("cmake", cmake_ver))
 
 load("gsi_common")
-load(pathJoin("prod_util", prod_util_ver))
 
 pushenv("GSI_BINARY_SOURCE_DIR", "/gpfs/f6/bil-fire8/world-shared/GSI_data/fix/gsi/20241022")
 

diff --git a/modulefiles/gsi_hera.gnu.lua b/modulefiles/gsi_hera.gnu.lua
diff --git a/modulefiles/gsi_hera.intel.lua b/modulefiles/gsi_hera.intel.lua
@@ -1,21 +1,24 @@
 help([[
 ]])
 
-prepend_path("MODULEPATH", "/contrib/spack-stack/spack-stack-1.6.0/envs/gsi-addon-dev-rocky8/install/modulefiles/Core")
+prepend_path("MODULEPATH", "/contrib/spack-stack/spack-stack-1.9.2/envs/ue-oneapi-2024.2.1/install/modulefiles/Core")
 
-local python_ver=os.getenv("python_ver") or "3.11.6"
-local stack_intel_ver=os.getenv("stack_intel_ver") or "2021.5.0"
-local stack_impi_ver=os.getenv("stack_impi_ver") or "2021.5.1"
-local cmake_ver=os.getenv("cmake_ver") or "3.23.1"
-local prod_util_ver=os.getenv("prod_util_ver") or "2.1.1"
+local stack_oneapi_ver=os.getenv("stack_oneapi_ver") or "2024.2.1"
+local stack_intel_oneapi_mpi_ver=os.getenv("stack_intel_oneapi_mpi_ver") or "2021.13"
+local mkl_ver=os.getenv("mkl_ver") or "2024.2.1"
+local stack_python_ver=os.getenv("stack_python_ver") or "3.11.7"
+local cmake_ver=os.getenv("cmake_ver") or "3.27.9"
 
-load(pathJoin("stack-intel", stack_intel_ver))
-load(pathJoin("stack-intel-oneapi-mpi", stack_impi_ver))
-load(pathJoin("python", python_ver))
+load(pathJoin("stack-oneapi", stack_oneapi_ver))
+load(pathJoin("stack-intel-oneapi-mpi", stack_intel_oneapi_mpi_ver))
+load(pathJoin("mkl", mkl_ver))
+load(pathJoin("stack-python", stack_python_ver))
 load(pathJoin("cmake", cmake_ver))
 
 load("gsi_common")
-load(pathJoin("prod_util", prod_util_ver))
+
+unload("impi/2024.2.1")
+load("impi/2022.1.2")
 
 pushenv("CFLAGS", "-xHOST")
 pushenv("FFLAGS", "-xHOST")

diff --git a/modulefiles/gsi_hercules.intel.lua b/modulefiles/gsi_hercules.intel.lua
@@ -1,22 +1,26 @@
 help([[
 ]])
 
-prepend_path("MODULEPATH", "/work/noaa/epic/role-epic/spack-stack/hercules/spack-stack-1.6.0/envs/gsi-addon-env/install/modulefiles/Core")
+prepend_path("MODULEPATH", "/apps/contrib/spack-stack/spack-stack-1.9.2/envs/ue-oneapi-2024.1.0/install/modulefiles/Core")
 
-local stack_python_ver=os.getenv("stack_python_ver") or "3.11.6"
-local stack_intel_ver=os.getenv("stack_intel_ver") or "2021.9.0"
-local stack_impi_ver=os.getenv("stack_impi_ver") or "2021.9.0"
-local cmake_ver=os.getenv("cmake_ver") or "3.23.1"
-local prod_util_ver=os.getenv("prod_util_ver") or "2.1.1"
+local stack_oneapi_ver=os.getenv("stack_oneapi_ver") or "2024.2.1"
+local stack_intel_oneapi_mpi_ver=os.getenv("stack_intel_oneapi_mpi_ver") or "2021.13"
+local intel_oneapi_mkl_ver=os.getenv("intel_oneapi_mkl_ver") or "2024.2.1"
+local stack_python_ver=os.getenv("stack_python_ver") or "3.11.7"
+local cmake_ver=os.getenv("cmake_ver") or "3.27.9"
 
-load(pathJoin("stack-intel", stack_intel_ver))
-load(pathJoin("stack-intel-oneapi-mpi", stack_impi_ver))
-load(pathJoin("python", stack_python_ver))
+load(pathJoin("stack-oneapi", stack_oneapi_ver))
+load(pathJoin("stack-intel-oneapi-mpi", stack_intel_oneapi_mpi_ver))
+load(pathJoin("intel-oneapi-mkl", intel_oneapi_mkl_ver))
+load(pathJoin("stack-python", stack_python_ver))
 load(pathJoin("cmake", cmake_ver))
 
 load("gsi_common")
-load(pathJoin("prod_util", prod_util_ver))
-load("intel-oneapi-mkl/2022.2.1")
+
+unload("intel-oneapi-mpi/2021.13.1")
+load("intel-oneapi-mpi/2021.7.1")
+
+load("tar/1.34")
 
 pushenv("CFLAGS", "-xHOST")
 pushenv("FFLAGS", "-xHOST")

diff --git a/modulefiles/gsi_jet.intel.lua b/modulefiles/gsi_jet.intel.lua
diff --git a/modulefiles/gsi_orion.intel.lua b/modulefiles/gsi_orion.intel.lua
@@ -1,22 +1,21 @@
 help([[
 ]])
 
-prepend_path("MODULEPATH", "/work/noaa/epic/role-epic/spack-stack/orion/spack-stack-1.6.0/envs/gsi-addon-env-rocky9/install/modulefiles/Core")
+prepend_path("MODULEPATH", "/apps/contrib/spack-stack/spack-stack-1.9.2/envs/ue-oneapi-2024.1.0/install/modulefiles/Core")
 
-local stack_python_ver=os.getenv("stack_python_ver") or "3.11.6"
-local stack_intel_ver=os.getenv("stack_intel_ver") or "2021.9.0"
-local stack_impi_ver=os.getenv("stack_impi_ver") or "2021.9.0"
-local cmake_ver=os.getenv("cmake_ver") or "3.23.1"
-local prod_util_ver=os.getenv("prod_util_ver") or "2.1.1"
+local stack_oneapi_ver=os.getenv("stack_oneapi_ver") or "2024.2.1"
+local stack_intel_oneapi_mpi_ver=os.getenv("stack_intel_oneapi_mpi_ver") or "2021.13"
+local intel_oneapi_mkl_ver=os.getenv("intel_oneapi_mkl_ver") or "2024.2.1"
+local stack_python_ver=os.getenv("stack_python_ver") or "3.11.7"
+local cmake_ver=os.getenv("cmake_ver") or "3.27.9"
 
-load(pathJoin("stack-intel", stack_intel_ver))
-load(pathJoin("stack-intel-oneapi-mpi", stack_impi_ver))
-load(pathJoin("python", stack_python_ver))
+load(pathJoin("stack-oneapi", stack_oneapi_ver))
+load(pathJoin("stack-intel-oneapi-mpi", stack_intel_oneapi_mpi_ver))
+load(pathJoin("intel-oneapi-mkl", intel_oneapi_mkl_ver))
+load(pathJoin("stack-python", stack_python_ver))
 load(pathJoin("cmake", cmake_ver))
 
 load("gsi_common")
-load(pathJoin("prod_util", prod_util_ver))
-load("intel-oneapi-mkl/2022.2.1")
 
 pushenv("CFLAGS", "-xHOST")
 pushenv("FFLAGS", "-xHOST")

diff --git a/modulefiles/gsi_s4.intel.lua b/modulefiles/gsi_s4.intel.lua