Updates for soil moisture and soil temperature analysis#675

Merged

RussTreadon-NOAA merged 178 commits into

NOAA-EMC:developfrom

ClaraDraper-NOAA:feature/2mDA

Feb 7, 2024

Commits on Sep 18, 2020

updates to handle overlow of 32 bit integers, make code run in debug mode

jswhit2
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jswhit2
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Commits on Sep 19, 2020

update to include RTPS inflation

jswhit2
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Commits on Oct 9, 2020

add 'write_ensmean'

jswhit2
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require use_qsatmean=T if pseudo_rh=T when write_ensmean=T

jswhit2
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update

jswhit2
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write out ens mean increment

jswhit2
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Commits on Oct 15, 2020

GitHub Issue NOAA-EMC/GSI#2 merge release/gfsda.v16.0.0 at 1d3e30a into master
RussTreadon-NOAA
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Commits on Oct 20, 2020

don't append hour string unless fhr > 0

jswhit2
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jswhit2
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add some comments

jswhit2
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Merge branch 'master' into feature/enkf-64bit

jswhit2
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Commits on Oct 23, 2020

remove openmp parallel regions that were causing problems on orion
Jeffrey S Whitaker
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Commits on Nov 4, 2020

utility for 'partial' recentering
Jeffrey S Whitaker
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Commits on Nov 5, 2020

update
Jeffrey S Whitaker
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Commits on Nov 6, 2020

Merge remote-tracking branch 'upstream/master'

jswhit2
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merge from upstream master

jswhit2
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Merge branch 'master' into feature/enkf-64bit

jswhit2
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Commits on Nov 21, 2020

add beta_e0 parameter

jswhit2
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Commits on Nov 24, 2020

Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Merge branch 'master' into feature/enkf-64bit

jswhit2
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port 2mda changes from Clara's fork

jswhit2
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initial updates for global_2mDA

jswhit2
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jswhit2
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Commits on Dec 4, 2020

update

jswhit2
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Commits on Dec 24, 2020

Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Merge branch 'master' into feature/enkf-64bit

jswhit2
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Commits on Dec 29, 2020

Merge remote-tracking branch 'upstream/master' into feature/2mDA

jswhit2
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Commits on Dec 31, 2020

fix bugs in readconvobs

jswhit2
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Commits on Jan 2, 2021

update

jswhit2
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Commits on Jan 6, 2021

add writeincrement_2mDA

jswhit2
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don't divide obs by sat humidity if global_2mDA

jswhit2
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Commits on Jan 10, 2021

uncomment diagnostic print

jswhit2
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Commits on Jan 21, 2021

Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Merge branch 'master' into feature/enkf-64bit

jswhit2
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Commits on Feb 6, 2021

Changed soil update variables from soilw to slc (liquid only)
ClaraDraper-NOAA
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Commits on Feb 17, 2021

Changed soil update variables from soilw to slc (liquid only)
ClaraDraper-NOAA
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Commits on Feb 19, 2021

add taper for stratospheric humidity increment

jswhit2
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Commits on Feb 22, 2021

taper_strat

jswhit2
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read in first guess separately for enkf and var

jswhit2
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fix bug introduced in last commits

jswhit2
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Commits on Feb 25, 2021

fix delz increment calculation

jswhit2
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calculate delz increment so it is negative for netcdf (remove sign flip)

jswhit2
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fix typo

jswhit2
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print out min/max ob time

jswhit2
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update

jswhit2
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update

jswhit2
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Commits on Mar 2, 2021

fix delz calculations so delz is always <0, incr is a-f, and sign flip only for nemsio if background delz>0
Jeffrey S Whitaker
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fix missing declaration of krev
Jeffrey S Whitaker
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fix sign of delz
Jeffrey S Whitaker
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Commits on Mar 3, 2021

fix delz to be consistent with PR #116

jswhit2
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jswhit2
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global_2mDA updates for 2m obs:
ClaraDraper-NOAA
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Merge branch 'feature/2mDA_csd' of https://github.com/ClaraDraper-NOAA/GSI into feature/2mDA_csd
ClaraDraper-NOAA
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Commits on Mar 11, 2021

fix integer arithmetic so +/-30 minute windows work (with l4densvar=F)

jswhit2
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jswhit2
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Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Merge branch 'master' into feature/enkf-64bit

jswhit2
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revert previous fix for hourly updating problem

jswhit2
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jswhit2
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fix typo

jswhit2
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Commits on Mar 30, 2021

Merge pull request #1 from ClaraDraper-NOAA/feature/2mDA_csd
Jeff Whitaker
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Commits on Apr 26, 2021

add new parameter mincorrlength_fact
Jeffrey S Whitaker
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set nobsl_max=-1 if nobstot < nobsl_max
Jeffrey S Whitaker
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bound corrlength between correlength and mincorrlength_fact*corrlength if < 0
Jeffrey S Whitaker
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Commits on Apr 27, 2021

add tapering of humidity increments in stratosphere

jswhit2
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jswhit2
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add tapering of humidity increments in strat

jswhit2
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Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Merge branch 'master' into feature/enkf-64bit

jswhit2
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fix netcdf bug

jswhit2
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Commits on Apr 29, 2021

populate ak,bk

jswhit2
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Commits on Apr 30, 2021

fixes for strat tapering

jswhit2
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Commits on May 19, 2021

Merge branch 'NOAA-EMC:master' into master
Jeff Whitaker
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Merge branch 'NOAA-EMC:master' into feature/enkf-64bit
Jeff Whitaker
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Commits on Jun 24, 2021

Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Merge branch 'master' into feature/enkf-64bit

jswhit2
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jswhit2
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Commits on Jun 25, 2021

fix writing of ensemble mean

jswhit2
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jswhit2
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Commits on Jul 15, 2021

Merge remote-tracking branch 'upstream/master'
Jeffrey S Whitaker
committed

Commits on Jul 28, 2021

Merge remote-tracking branch 'upstream/master'
Jeffrey S Whitaker
committed
Merge branch 'master' into feature/enkf-64bit
Jeffrey S Whitaker
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Merge branch 'master' into feature/2mDA
Jeffrey S Whitaker
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Commits on Aug 4, 2021

Commits on Aug 18, 2021

Merge remote-tracking branch 'upstream/master'
Jeffrey S Whitaker
committed
Merge branch 'master' into feature/enkf-64bit
Jeffrey S Whitaker
committed
Merge pull request #2 from ClaraDraper-NOAA/feature/2mDA_csd
Jeff Whitaker
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Merge branch 'feature/enkf-64bit' into feature/2mDA
Jeffrey S Whitaker
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Commits on Aug 26, 2021

Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Commits on Sep 10, 2021

Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Commits on Oct 8, 2021

Merge remote-tracking branch 'upstream/master'
Jeffrey S Whitaker
committed

Commits on Nov 10, 2021

Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Merge branch 'NOAA-EMC:master' into master
Jeff Whitaker
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remove unneeded files

jswhit2
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jswhit2
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Commits on Nov 30, 2021

Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Commits on Dec 16, 2021

Merge remote-tracking branch 'upstream/master'
Jeffrey S Whitaker
committed

Commits on Jan 6, 2022

Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Commits on Jan 19, 2022

Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Commits on Mar 2, 2022

Bugfix for writing out 2mDA increments.
ClaraDraper-NOAA
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Merge pull request #3 from ClaraDraper-NOAA/feature/2mDA
Jeff Whitaker
authored
Merge remote-tracking branch 'upstream/master'
Jeffrey S Whitaker
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Merge branch 'master' of https://github.com/jswhit/GSI
Jeffrey S Whitaker
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Merge branch 'master' into feature/2mDA
Jeffrey S Whitaker
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Commits on Apr 13, 2022

Merge remote-tracking branch 'upstream/master'

jswhit2
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jswhit2
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Commits on Jun 1, 2022

stage-1 merge with regional 2mDA from GSL
guoqing-noaa
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Commits on Jul 6, 2022

trying to add save_jacobian for 2mT DA
guoqing-noaa
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Commits on Jul 9, 2022

Commits on Jul 14, 2022

Reverted drpx and dpres code for use_2m_obs option, and changes to compile.
ClaraDraper-NOAA
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Merge remote-tracking branch 'upstream/develop'

jswhit2
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jswhit2
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Commits on Jul 26, 2022

Commits on Aug 16, 2022

Merge pull request #6 from ClaraDraper-NOAA/feature/2mDA_4atmosupdate
Jeff Whitaker
authored

Commits on Aug 18, 2022

Commits on Sep 1, 2022

Bugfix in setupt - settings obs are surface level for hofx_2m_file option only if are surface obs.
ClaraDraper-NOAA
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Commits on Sep 23, 2022

Merge remote-tracking branch 'upstream/develop'

jswhit2
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removing unnecessary print statements.
ClaraDraper-NOAA
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Merge branch 'master' into feature/2mDA

jswhit2
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Merge branch 'feature/2mDA' into bugfix2mDA
Jeff Whitaker
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Merge pull request #8 from ClaraDraper-NOAA/bugfix2mDA
Jeff Whitaker
authored

Commits on Oct 12, 2022

minor fix on src/gsi/setupt.f90
guoqing-noaa
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Commits on Oct 26, 2022

more changes
guoqing-noaa
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Merge pull request #9 from guoqing-noaa/bugfix
Jeff Whitaker
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Commits on Nov 14, 2022

Merge remote-tracking branch 'upstream/develop'

jswhit2
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jswhit2
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Commits on Nov 22, 2022

Merge remote-tracking branch 'upstream/develop'

jswhit2
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jswhit2
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Merge remote-tracking branch 'upstream/develop'

jswhit2
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Commits on Jan 3, 2023

minor fix on read_prepbufr.f90
guoqing-noaa
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Commits on Jan 4, 2023

Commits on Jan 18, 2023

update read_prepbufr.f90 for surface qob
guoqing-noaa
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Merge remote-tracking branch 'upstream/develop'

jswhit2
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jswhit2
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Merge branch 'master' into feature/2mDA

jswhit2
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changes in response to PR review
guoqing-noaa
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Merge pull request #10 from guoqing-noaa/pr2mDA
Jeff Whitaker
authored

Commits on Mar 9, 2023

Commits on Mar 10, 2023

Tidy up routine to read in sfc background files.
ClaraDraper-NOAA
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Commits on Mar 12, 2023

bug fix to qm in read_prepbufr.
ClaraDraper-NOAA
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Commits on Mar 20, 2023

Commits on Mar 21, 2023

Commits on Mar 22, 2023

Commits on Mar 24, 2023

Commits on Mar 28, 2023

Merge branch 'develop' into feature/2m_hofx
ClaraDraper-NOAA
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Commits on Apr 21, 2023

Bugfixes to fix crash due to zero pressure ozone ob, and to run in debug mode.
ClaraDraper-NOAA
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Commits on Apr 24, 2023

Added option to write out ensemble mean, without using use_qsatensmean.
ClaraDraper-NOAA
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Commits on Apr 26, 2023

Commits on May 23, 2023

bug fix.
ClaraDraper-NOAA
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Commits on May 24, 2023

Write soil update as increments, regardless of whether atmos written as incr or anal.
ClaraDraper-NOAA
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Commits on Jun 16, 2023

Commits on Aug 21, 2023

Jeff's bugix to avoid the mystery crash.
ClaraDraper-NOAA
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Commits on Jan 3, 2024

Commits on Jan 4, 2024

Reverted regression_vars.sh to develop.
ClaraDraper-NOAA
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Commits on Feb 5, 2024

Merge branch 'develop' into feature/2mDA
ClaraDraper-NOAA
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Commits on Feb 7, 2024

Minor tidy-up in response to Russ Treadon's review.
ClaraDraper-NOAA
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