Add regression test fv3_ccpp_gsd_sar_25km_debug

parm/ccpp_gsd_sar_25km-model_configure.IN

@@ -0,0 +1,48 @@
+total_member:            1
+PE_MEMBER01:             24
+start_year:              2019
+start_month:             05
+start_day:               20
+start_hour:              00
+start_minute:            0
+start_second:            0
+nhours_fcst:             1
+RUN_CONTINUE:            .false.
+ENS_SPS:                 .false.
+dt_atmos:                300
+cpl:                     .false.
+calendar:                'julian'
+memuse_verbose:          .false.
+atmos_nthreads:          2
+use_hyper_thread:        .false.
+ncores_per_node:         24
+debug_affinity:          .true.
+restart_interval:        0
+output_1st_tstep_rst:    .false.
+
+quilting:                .true.
+print_esmf:              .false.
+write_groups:            1
+write_tasks_per_group:   4
+num_files:               2
+filename_base:           'dyn''phy'
+output_file:             'netcdf'
+write_nemsioflip:        .false.
+write_fsyncflag:         .false.
+
+output_grid:             'lambert_conformal'
+cen_lon:                 -97.5
+cen_lat:                 38.5
+stdlat1:                 38.5
+stdlat2:                 38.5
+nx:                      191
+ny:                      97
+lon1:                    -120.72962370
+lat1:                    25.11648583
+dx:                      25000.0
+dy:                      25000.0
+
+nfhout:                  1
+nfhmax_hf:               60
+nfhout_hf:               1
+nsout:                   -1

parm/ccpp_gsd_sar_25km.nml.IN

@@ -0,0 +1,312 @@
+&amip_interp_nml
+     interp_oi_sst = .true.
+     use_ncep_sst = .true.
+     use_ncep_ice = .false.
+     no_anom_sst = .false.
+     data_set = 'reynolds_oi',
+     date_out_of_range = 'climo',
+/
+
+&atmos_model_nml
+     blocksize = 550
+     chksum_debug = .false.
+     dycore_only = .false.
+     fdiag = 1
+     ccpp_suite = 'FV3_GSD_SAR'
+/
+
+&diag_manager_nml
+     prepend_date = .F.
+/
+
+&fms_io_nml
+     checksum_required   = .false.
+     max_files_r = 100,
+     max_files_w = 100,
+/
+
+&fms_nml
+     clock_grain = 'ROUTINE',
+     domains_stack_size = 3000000,
+     print_memory_usage = .false.
+/
+
+&fv_grid_nml
+     grid_file = 'INPUT/grid_spec.nc'
+/
+
+&fv_core_nml
+     layout   = 4,5
+     io_layout = 1,1
+     npx      = 201
+     npy      = 111
+     ntiles   = 1,
+     npz    = 64
+     !grid_type = -1
+     make_nh = .T.
+     fv_debug = .T.
+     range_warn = .T.
+     reset_eta = .F.
+     n_sponge = 24
+     nudge_qv = .F.
+     tau = 5.
+     rf_cutoff = 20.e2
+     d2_bg_k1 = 0.20
+     d2_bg_k2 = 0.04
+     kord_tm = -11
+     kord_mt =  11
+     kord_wz =  11
+     kord_tr =  11
+     hydrostatic = .F.
+     phys_hydrostatic = .F.
+     use_hydro_pressure = .F.
+     beta = 0.
+     a_imp = 1.
+     p_fac = 0.1
+     k_split  = 4
+     n_split  = 5
+     nwat = 6
+     na_init = 1
+     d_ext = 0.0
+     dnats = 0
+     fv_sg_adj = 300
+     d2_bg = 0.
+     nord =  2
+     dddmp = 0.1
+     d4_bg = 0.12
+     vtdm4 = 0.02
+     ke_bg = 0.
+     do_vort_damp = .true.
+     external_ic = .T.
+     external_eta = .T.
+     gfs_phil = .false.
+     nggps_ic = .T.
+     mountain = .F.
+     ncep_ic = .F.
+     d_con = 1.0
+     delt_max = 0.002
+     hord_mt = 6
+     hord_vt = 6
+     hord_tm = 6
+     hord_dp = -6
+     hord_tr = 8
+     adjust_dry_mass = .F.
+     consv_te = 0.
+     do_sat_adj = .F.
+     consv_am = .F.
+     fill = .T.
+     dwind_2d = .F.
+     print_freq = 6
+     warm_start = .F.
+     no_dycore = .false.
+     z_tracer = .T.
+     read_increment = .F.
+     res_latlon_dynamics = "fv3_increment.nc"
+
+     do_schmidt = .true.
+     target_lat = 38.5
+     target_lon = -97.5
+     stretch_fac = 0.999
+!     nord_zs_filter = 4
+     n_zs_filter = 0
+     regional = .true.
+     bc_update_interval = 6
+
+     full_zs_filter = .F. !unreleased feature
+
+     nord_zs_filter = 4
+     n_zs_filter = 0 ! safety
+/
+
+&surf_map_nml
+     zero_ocean = .F.
+     cd4 = 0.12
+     cd2 = -1
+     n_del2_strong = 0
+     n_del2_weak = 2
+     n_del4 = 1
+     max_slope = 0.4
+     peak_fac = 1.
+/
+
+&external_ic_nml
+     filtered_terrain = .true.
+     levp = 65
+     gfs_dwinds = .true.
+     checker_tr = .F.
+     nt_checker = 0
+/
+
+&gfs_physics_nml
+     fhzero         = 1.
+     h2o_phys       = .true.
+     ldiag3d        = .false.
+     fhcyc          = 0.
+     nst_anl        = .true.
+     use_ufo        = .true.
+     pre_rad        = .false.
+     ncld           = 5
+     imp_physics    = 8
+!     ttendlim       = 0.005
+     ttendlim       = 50.0
+     ltaerosol      = .T.
+     lradar         = .T.
+     pdfcld         = .false.
+     fhswr          = 3600.
+     fhlwr          = 3600.
+     ialb           = 1
+     iems           = 1
+     iaer           = 111
+     ico2           = 2
+     isubc_sw       = 2
+     isubc_lw       = 2
+     isol           = 2
+     lwhtr          = .true.
+     swhtr          = .true.
+     cnvgwd         = .false.
+     shal_cnv       = .false.
+     cal_pre        = .false.
+     redrag         = .true.
+     dspheat        = .true.
+     hybedmf        = .false.
+     satmedmf       = .false.
+     lheatstrg      = .F.
+     do_mynnedmf    = .true.
+     do_mynnsfclay  = .false.
+     random_clds    = .false.
+     trans_trac     = .true.
+     cnvcld         = .false.
+     imfshalcnv     = 0
+     imfdeepcnv     = 0
+     cdmbgwd        = 3.5,0.25
+     prslrd0        = 0.
+     ivegsrc        = 1
+     isot           = 1
+     debug          = .false.
+     oz_phys        = .false.
+     oz_phys_2015   = .true.
+     nstf_name      = 2,1,1,0,5
+     cplflx         = .F.
+     iau_delthrs    = 6
+     iaufhrs        = 30
+     iau_inc_files  = ''
+     do_sppt        = .F.
+     do_shum        = .F.
+     do_skeb        = .F.
+     do_sfcperts    = .F.
+     lsm            = 3
+     lsoil          = 9
+     lsoil_lsm      = 9
+     iopt_dveg      = 2
+     iopt_crs       = 1
+     iopt_btr       = 1
+     iopt_run       = 1
+     iopt_sfc       = 1
+     iopt_frz       = 1
+     iopt_inf       = 1
+     iopt_rad       = 1
+     iopt_alb       = 2
+     iopt_snf       = 4
+     iopt_tbot      = 2
+     iopt_stc       = 1
+     icloud_bl         = 1
+     bl_mynn_tkeadvect = .true.
+     bl_mynn_edmf      = 1
+     bl_mynn_edmf_mom  = 1
+/
+
+&cires_ugwp_nml
+     knob_ugwp_solver  = 2
+     knob_ugwp_source  = 1,1,0,0
+     knob_ugwp_wvspec  = 1,25,25,25
+     knob_ugwp_azdir   = 2,4,4,4
+     knob_ugwp_stoch   = 0,0,0,0
+     knob_ugwp_effac   = 1,1,1,1
+     knob_ugwp_doaxyz  = 1
+     knob_ugwp_doheat  = 1
+     knob_ugwp_dokdis  = 1
+     knob_ugwp_ndx4lh  = 1
+     knob_ugwp_version = 0
+     launch_level      = 25
+/
+
+&interpolator_nml
+     interp_method = 'conserve_great_circle'
+/
+
+&namsfc
+     FNGLAC   = "global_glacier.2x2.grb",
+     FNMXIC   = "global_maxice.2x2.grb",
+     FNTSFC   = "RTGSST.1982.2012.monthly.clim.grb",
+     FNSNOC   = "global_snoclim.1.875.grb",
+     FNZORC   = "igbp",
+     FNALBC   = "global_snowfree_albedo.bosu.t126.384.190.rg.grb",
+     FNALBC2  = "global_albedo4.1x1.grb",
+     FNAISC   = "CFSR.SEAICE.1982.2012.monthly.clim.grb",
+     FNTG3C   = "global_tg3clim.2.6x1.5.grb",
+     FNVEGC   = "global_vegfrac.0.144.decpercent.grb",
+     FNVETC   = "global_vegtype.igbp.t126.384.190.rg.grb",
+     FNSOTC   = "global_soiltype.statsgo.t126.384.190.rg.grb",
+     FNSMCC   = "global_soilmgldas.t126.384.190.grb",
+     FNMSKH   = "seaice_newland.grb",
+     FNTSFA   = "",
+     FNACNA   = "",
+     FNSNOA   = "",
+     FNVMNC   = "global_shdmin.0.144x0.144.grb",
+     FNVMXC   = "global_shdmax.0.144x0.144.grb",
+     FNSLPC   = "global_slope.1x1.grb",
+     FNABSC   = "global_mxsnoalb.uariz.t126.384.190.rg.grb",
+     LDEBUG   =.false.,
+     FSMCL(2) = 99999
+     FSMCL(3) = 99999
+     FSMCL(4) = 99999
+     FTSFS    = 90
+     FAISS    = 99999
+     FSNOL    = 99999
+     FSICL    = 99999
+     FTSFL    = 99999,
+     FAISL    = 99999,
+     FVETL    = 99999,
+     FSOTL    = 99999,
+     FvmnL    = 99999,
+     FvmxL    = 99999,
+     FSLPL    = 99999,
+     FABSL    = 99999,
+     FSNOS    = 99999,
+     FSICS    = 99999,
+
+&nam_stochy
+     lon_s=768,
+     lat_s=384, 
+     ntrunc=382,
+     SKEBNORM=1,
+     SKEB_NPASS=30,
+     SKEB_VDOF=5,
+     SKEB=@[SKEB],
+     SKEB_TAU=2.16E4,
+     SKEB_LSCALE=1000.E3,
+     SHUM=@[SHUM],
+     SHUM_TAU=21600,
+     SHUM_LSCALE=500000,
+     SPPT=@[SPPT],
+     SPPT_TAU=21600,
+     SPPT_LSCALE=500000,
+     SPPT_LOGIT=.TRUE.,
+     SPPT_SFCLIMIT=.TRUE.,
+     ISEED_SHUM=1,
+     ISEED_SKEB=2,
+     ISEED_SPPT=3,
+/
+&nam_sfcperts
+     NSFCPERT=6,
+     PERTZ0=-999.,
+     PERTSHC=-999.,
+     PERTZT=-999.,
+     PERTLAI=-999.,
+     PERTVEGF=-999.,
+     PERTALB=-999.,
+     SFC_TAU=21600,
+     SFC_LSCALE=500000,
+     ISEED_SFC=0,
+     SPPT_LAND=.FALSE.,
+/