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Artificial intelligence and computational medicine (ELMED219) - course material 2025

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ELMED219: Artificial intelligence and computational medicine (2025)


If you have a subscription to ChatGPT Plus, you can also try out the Medical AI Assistant (UiBmed - ELMED219 & BMED365) and see if you can get it to answer some of your questions.



Course overview

ELMED219 examines how artificial intelligence and computational tools are shaping modern healthcare. It is offered in collaboration with the Department of Biomedicine at the University of Bergen (UiB), the Department of Computer Science, Electrical Engineering and Mathematical Sciences at the Western Norway University of Applied Sciences (HVL), and the Medical AI group at the Mohn Medical Imaging and Visualization Center (MMIV).

What you will learn

This course provides practical knowledge in computational thinking, medical imaging, and the use of machine learning and AI in healthcare. It also addresses ethical and regulatory challenges, giving students a balanced perspective on innovation in medical AI.

Practical applications

Through exercises and demonstrations, participants will work on practical applications, including analyzing MRI data, segmenting medical images, building biomarker prediction models, and exploring concepts like Patient similarity networks and multimodal data analysis. The course also introduces large language models (foundation models) and their potential use in healthcare.

Skills and tools

Students will gain experience with Python programming, Jupyter notebooks, modern AI tools like ChatGPT, Gemini, and Claude, as well as cloud computing and AI-assisted coding. Emphasis is placed on open science and reproducible research practices to prepare students for both academic and practical settings.

Team project

The course includes a team project where students collaborate to design and build an AI-driven solution to a real healthcare challenge. Teams will take their ideas from concept to prototype and present them as a potential healthcare startup.

Why take this course?

ELMED219 is an opportunity to gain valuable skills and insights into the use of AI in medicine and healthcare.

Open access materials

All course materials are openly available in this GitHub repository. See also BMED365.

For enrolled students

Note: Students enrolled in the course can find additional practical information on MittUiB.

  • For academic questions about the course, contact course coordinator Arvid Lundervold (UiB).

  • For practical or administrative inquiries, contact the Studies Section at the Department of Biomedicine at [email protected]

The content for the course is offered with a CC BY-SA 4.0 license unless otherwise stated.


Tentative time schedule

OBS: Some of the links are to earlier versions of the course. The content will soon be updated for the 2025 version

TIME ACTIVITY
WEEK 1:
Fri, Jan 3
On your own Get an overview of the course; installation of software and/or test out Google Colab
Follow the instructions at setup.md and MittUiB
WEEK 2:
Mon, Jan 6
10:15-14:00
BB Hist 1
Information About the course
Motivation lectures
 - Computational medicine
 - Medical AI
 - SW-installation
 - Tools
Arvid and Alexander Lundervold
Wed, Jan 8
14:15-16:00
BB Hist 1
AI-driven innovation in healthcare & About the course project
Arvid and Alexander Lundervold
Fri, Jan 10
10:15-11:30
BB Hist 1
LAB 0: Introduction to theory and tools for machine learning
Alexander Lundervold
11:45-13:00
BB Hist 1
LAB 1: Network science and patient similarity networks (PSN)
Arvid Lundervold
WEEK 3:
Tue, Jan 14
09:15-13:00
BB Hist 1
AI-assisted innovation cont. & Python programming; recap of Lab0, Lab1
Arvid and Alexander Lundervold
Fri, Jan 17
08:15-13:00
BB Hist 1
Lab 2: Deep learning
Arvid Lundervold
WEEK 4:
Tue, Jan 21
09:15-12:00
BB Hist 1
Lab 3: Generative AI and Large Language Models
Alexander Lundervold
13:15-16:00
BB Hist 1
Meet-up for team project brainstorming and coaching
Arvid and Alexander Lundervold
WEEK 5:
Tue, Jan 28
08:15-10:00
BB Hist 1
Project presentations by team (jointly with BMED365)
Arvid and Alexander Lundervold
Thu, Jan 30
16:00 Deadline for the Team Project Report - joint with BMED365 (hand in via MittUiB)
Fri, Jan 31
Home exam: Duration: Expected workload $\approx$ 2 hours;
Assignment is handed out: 31.01.2025, 11:00;
Submission deadline: 31.01.2025, 15:00;
Examination system: Inspera Digital exam

Previous versions of the ELMED219 course

Year Link
2024 https://github.com/MMIV-ML/ELMED219-2024
2023 https://github.com/MMIV-ML/ELMED219-2023
2022 https://github.com/MMIV-ML/ELMED219-2022
2021 https://github.com/MMIV-ML/ELMED219-2021
2020 https://github.com/MMIV-ML/ELMED219-2020
2019 https://github.com/MMIV-ML/ELMED219x-2019

Previous versions of the BMED360 course

"In Vivo Imaging and Physiological Modelling"

Year Link
2021 https://github.com/computational-medicine/BMED360-2021
2020 https://github.com/computational-medicine/BMED360-2020

Previous versions of the BMED365 course

"Computational imaging, modelling and AI in biomedicine"

Year Link
2024 https://github.com/MMIV-ML/BMED365-2024

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