Polygenic risk effects of temporal lobe epilepsy on brain morphology in typical development

Description

Authors:
Alexander Ngo: alexander.ngo@mail.mcgill.ca
Boris C. Bernhardt: boris.bernhardt@mcgill.ca (corresponding author)

Cite:
DOI:
Preprint: https://www.biorxiv.org/content/10.1101/2025.01.17.633277v1

This repository contains the code to follow the workflow for our imaging-genetic analysis

Repository content

├── README.md
│
├── data
│   ├── raw
│   ├── processed
│   └── results
│       ├── 01_geneticCorrelation
│       ├── 02_epicentreMapping
│       ├── 03_atrophyAssociation
│       ├── 04_epicentreAssociation
│       ├── s01_subcorticalCorrelation
│       ├── s02_thresholdConsistency
│       ├── s03_epicentreConsistency
│       ├── s04_atrophyConsistency
│       ├── s05_diseaseEpicentreConsistency
│       ├── s06_psychiatryAtrophySpecificity
│       └── s07_psychiatryEpicentreSpecificity
│
├── requirements.txt   
│
└── src
   ├── datasets.py
   ├── analyses
   │   ├── 01_geneticCorrelation.py
   │   ├── 02_epicentreMapping.py
   │   ├── 03_atrophyAssociation.py
   │   ├── 04_epicentreAssociation.py
   │   ├── s01_subcorticalCorrelation.py
   │   ├── s02_thresholdConsistency.py
   │   ├── s03_epicentreConsistency.py
   │   ├── s04_atrophyConsistency.py
   │   ├── s05_diseaseEpicentreConsistency.py
   │   ├── s06_psychiatryAtrophySpecificity.py
   │   └── s07_psychiatryEpicentreSpecificity.py
   └── plots
       ├── f01_geneticCorrelation.py
       ├── f02_epicentreMapping.py
       ├── f03_atrophyAssociation.py
       ├── f04_epicentreAssociation.py
       ├── sf01_subcorticalCorrelation.py
       ├── sf02_thresholdConsistency.py
       ├── sf03_epicentreConsistency.py
       ├── sf04_atrophyConsistency.py
       ├── sf05_diseaseEpicentreConsistency.py
       ├── sf06_psychiatryAtrophySpecificity.py
       └── sf07_psychiatryEpicentreSpecificity.py

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