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binary annotation formats #228

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binary annotation formats #228

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lucasgautheron
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@lucasgautheron lucasgautheron commented Jun 4, 2021

(ultra low priority; proof of concept)

  • tests passing
  • documentation
  • dynamic extension
  • set output format an option for the merger
  • gzip
  • hdf5
  • parquet

@lucasgautheron lucasgautheron changed the title multiple storage support for annotations: add gzip gzip and hdf5 formats for annotations Jul 15, 2021
@lucasgautheron lucasgautheron changed the title gzip and hdf5 formats for annotations binary annotation formats Jul 15, 2021
@lucasgautheron lucasgautheron added the enhancement New feature or request label Jul 15, 2021
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According to this benchmark, it is not worth using HDF_Fixed in any case.

So we should use HDF_Table, taking advantage of categoricals, AND maybe merging annotations from different recordings together (which will require a bit of work and will make it harder to use datasets without the python API)

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