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@KolmogorovLab

Kolmogorov lab at NCI

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  1. hapdup hapdup Public

    Pipeline to convert a haploid assembly into diploid

    Python 103 11

  2. hapdiff hapdiff Public

    SV calling for diploid assemblies

    Python 28 3

  3. Severus Severus Public

    A tool for somatic structural variant calling using long reads

    Python 146 11

  4. Wakhan Wakhan Public

    Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data

    Python 57 2

Repositories

Showing 9 of 9 repositories
  • Wakhan Public

    Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data

    KolmogorovLab/Wakhan’s past year of commit activity
    Python 57 MIT 2 20 0 Updated Oct 3, 2025
  • Severus Public

    A tool for somatic structural variant calling using long reads

    KolmogorovLab/Severus’s past year of commit activity
    Python 146 11 29 1 Updated Oct 1, 2025
  • TreeHarmonizer Public
    KolmogorovLab/TreeHarmonizer’s past year of commit activity
    Jupyter Notebook 1 BSD-3-Clause 0 0 0 Updated Sep 22, 2025
  • Lumos Public
    KolmogorovLab/Lumos’s past year of commit activity
    Nextflow 5 0 1 0 Updated Sep 19, 2025
  • minda Public
    KolmogorovLab/minda’s past year of commit activity
    Python 24 4 5 1 Updated Apr 17, 2025
  • hapcorrect Public

    Haplotypes phase-switching errors correction in long reads

    KolmogorovLab/hapcorrect’s past year of commit activity
    Python 5 MIT 0 0 0 Updated Jan 24, 2025
  • hapdup Public

    Pipeline to convert a haploid assembly into diploid

    KolmogorovLab/hapdup’s past year of commit activity
    Python 103 11 8 0 Updated Jan 23, 2025
  • strainy Public Forked from katerinakazantseva/strainy

    Graph-based assembly phasing

    KolmogorovLab/strainy’s past year of commit activity
    Python 2 5 0 0 Updated Oct 31, 2024
  • hapdiff Public

    SV calling for diploid assemblies

    KolmogorovLab/hapdiff’s past year of commit activity
    Python 28 MIT 3 3 0 Updated Mar 22, 2024

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