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New version: Turing v0.35.0 #117933

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merged 1 commit into from
Oct 23, 2024

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- Drop support for Julia 1.9 and earlier. Minimum Julia version is now 1.10.
- Drop support for Tracker as an AD backend.
- Replace Tapir.jl with its reincarnated form, Mooncake.jl.

UUID: fce5fe82-541a-59a6-adf8-730c64b5f9a0
Repo: https://github.com/TuringLang/Turing.jl.git
Tree: 087dc4b605b5459e467f75b882c2a12616049821

Registrator tree SHA: 17aec322677d9b81cdd6b9b9236b09a3f1374c6a
JuliaRegistrator referenced this pull request in TuringLang/Turing.jl Oct 23, 2024
* CompatHelper: bump compat for DynamicPPL to 0.29, (keep existing compat) (#2339)

Co-authored-by: CompatHelper Julia <[email protected]>

* CompatHelper: bump compat for DynamicPPL to 0.29 for package test, (keep existing compat) (#2340)

Co-authored-by: CompatHelper Julia <[email protected]>

* Replace vectorize(d, r) -> DynamicPPL.tovec(r)

vectorize was removed in DynamicPPL 0.29.0

* Require Julia >= 1.9

* Add Julia 1.9 tests back

* Fix essential/ad tests

* Fix reconstruct calls in MH

* Update src/mcmc/mh.jl

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>

* Require Julia 1.10

* Change 1 -> I in MvNormal()

setting a real number as σ is deprecated

* Simplify tests as we no longer support Julia <1.8

* Simplify `set_namedtuple!`

* Remove conditional loading/exporting of Tapir

* Tapir -> Mooncake

* Update src/essential/Essential.jl

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>

* Remove Requires from Project.toml

* Bump minor version instead

* Restrict ADTypes to 1.9.0 for AutoMooncake()

* Re-enable Mooncake tests in mcmc/abstractmcmc

* Update the currently buggy and incorrect tilde overloads in `mh.jl` (#2360)

* More autoformatting (#2359)

* Bring more files into autoformatting fold

* Run JuliaFormatter

* Remove trailing whitespace

* Update comment in .JuliaFormatter.toml

* Fix bad merge

* Restrict Mooncake to >= 0.4.9

* Add MH test for LKJCholesky

* Remove Tracker

* Format imports

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>

* Add AD imports to Optimisation test

* Bump Mooncake compat in tests

* Bump Libtask version

* Get Optimization tests to pass CI

* Update API docs

* Write a changelog entry

* Update docs/src/api.md

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>

---------

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: CompatHelper Julia <[email protected]>
Co-authored-by: Tor Erlend Fjelde <[email protected]>
Co-authored-by: Markus Hauru <[email protected]>
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@JuliaTagBot JuliaTagBot merged commit 3ff5bf5 into master Oct 23, 2024
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@JuliaTagBot JuliaTagBot deleted the registrator-turing-fce5fe82-v0.35.0-1deb94ed27 branch October 23, 2024 21:43
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