Use pnpm as package manager for react-router

.github/workflows/typescript-code-analysis.yml

@@ -65,7 +65,7 @@ jobs:
         distribution: 'adopt'
         java-version: ${{ matrix.java }}
 
-    - name: Setup Node.js for Graph Visualization
+    - name: Setup Node.js
       uses: actions/setup-node@v4
       with:
         node-version-file: 'graph-visualization/.nvmrc'
@@ -112,6 +112,11 @@ jobs:
         key:
           ${{ runner.os }}-${{ hashFiles('**/*.sh') }}
 
+    - name: Setup pnpm for react-router
+      uses: pnpm/[email protected]
+      with:
+        version: 8.10.5
+
     - name: Download ${{ env.PROJECT_NAME }}-${{ env.REACT_ROUTER_VERSION }}
       working-directory: temp
       run: |

jupyter/NodeEmbeddingsTypescript.ipynb

@@ -243,7 +243,7 @@
    "source": [
     "def prepare_node_embeddings_for_2d_visualization(embeddings: pd.DataFrame) -> pd.DataFrame:\n",
     "    \"\"\"\n",
-    "    Reduces the dimensionality of the node embeddings (e.g. 64 floating point numbers in an array)\n",
+    "    Reduces the dimensionality of the node embeddings (e.g. 32 floating point numbers in an array)\n",
     "    to two dimensions for 2D visualization.\n",
     "    see https://scikit-learn.org/stable/modules/generated/sklearn.manifold.TSNE.html#sklearn.manifold.TSNE\n",
     "    \"\"\"\n",
@@ -448,7 +448,7 @@
     "    \"dependencies_projection_node\": \"Module\",\n",
     "    \"dependencies_projection_weight_property\": \"lowCouplingElement25PercentWeight\",\n",
     "    \"dependencies_projection_write_property\": \"embeddingsHashGNN\",\n",
-    "    \"dependencies_projection_embedding_dimension\":\"64\"\n",
+    "    \"dependencies_projection_embedding_dimension\":\"32\"\n",
     "}\n",
     "embeddings = create_node_embeddings(\"../cypher/Node_Embeddings/Node_Embeddings_2d_Hash_GNN_Stream.cypher\", typescript_module_embeddings_parameters)\n",
     "node_embeddings_for_visualization = prepare_node_embeddings_for_2d_visualization(embeddings)\n",

jupyter/OverviewJava.ipynb

@@ -492,6 +492,7 @@
     "name": "JohT"
    }
   ],
+  "code_graph_analysis_pipeline_data_validation": "ValidateJavaTypes",
   "kernelspec": {
    "display_name": "Python 3 (ipykernel)",
    "language": "python",

scripts/downloader/downloadReactRouter.sh

@@ -9,8 +9,13 @@
 
 # Note: This script is meant to be started within the temporary analysis directory (e.g. "temp/AnalysisName/")
 
+# Note: react-router uses pnpm as package manager which needs to be installed
+
 # Requires downloadMavenArtifact.sh
 
+# Fail on any error (errexit = exit on first error, errtrace = error inherited from sub-shell ,pipefail exist on errors within piped commands)
+set -o errexit -o errtrace -o pipefail
+
 # Get the analysis name from the middle part of the current file name (without prefix "download" and without extension)
 SCRIPT_FILE_NAME="$(basename -- "${BASH_SOURCE[0]}")"
 SCRIPT_FILE_NAME_WITHOUT_EXTENSION="${SCRIPT_FILE_NAME%%.*}"
@@ -29,15 +34,18 @@ fi
 PROJECT_VERSION=$1
 echo "download${ANALYSIS_NAME}: PROJECT_VERSION=${PROJECT_VERSION}"
 
+# Create runtime logs directory if it hasn't existed yet
+mkdir -p ./runtime/logs
+
 ################################################################
 # Download react-router source files to be analyzed
 ################################################################
 git clone https://github.com/remix-run/react-router.git source
 (
   cd source || exit
-  git checkout "react-router@${PROJECT_VERSION}"
-  yarn install || yarn
-  npx --yes @jqassistant/ts-lce >jqassostant-typescript-scan.log
+  git checkout "react-router@${PROJECT_VERSION}" || exit
+  pnpm install --frozen-lockfile || exit
+  npx --yes @jqassistant/ts-lce >./../runtime/logs/jqassostant-typescript-scan.log 2>&1 || exit
 )
 mkdir -p artifacts
 mv -nv "source/.reports/jqa/ts-output.json" "artifacts/ts-react-router-${PROJECT_VERSION}.json"

scripts/reports/NodeEmbeddingsCsv.sh

@@ -190,7 +190,7 @@ MODULE_PROJECTION="dependencies_projection=typescript-module-embeddings"
 MODULE_NODE="dependencies_projection_node=Module" 
 MODULE_WEIGHT="dependencies_projection_weight_property=lowCouplingElement25PercentWeight" 
 MODULE_DIMENSIONS="dependencies_projection_embedding_dimension=32" 
-MODULE_DIMENSIONS_HASHGNN="dependencies_projection_embedding_dimension=64"
+MODULE_DIMENSIONS_HASHGNN="dependencies_projection_embedding_dimension=32"
 
 if createUndirectedDependencyProjection "${MODULE_PROJECTION}" "${MODULE_NODE}" "${MODULE_WEIGHT}"; then
     time nodeEmbeddingsWithFastRandomProjection "${MODULE_PROJECTION}" "${MODULE_NODE}" "${MODULE_WEIGHT}" "${MODULE_DIMENSIONS}"