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add ompslpnc for geos adas along with cleanup. #1043

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Merged
PatNichols merged 3 commits into from
Sep 8, 2022
Merged

add ompslpnc for geos adas along with cleanup. #1043

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83ed95a
add ompslpnc for geos adas along with cleanup.
karpob Sep 7, 2022
f1733b9
fix coding norm.
karpob Sep 7, 2022
47da6d1
Merge branch 'develop' into feature/add_ompslpnc_for_geos
karpob Sep 7, 2022
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23 changes: 16 additions & 7 deletions src/gsi-ncdiag/gsi_ncdiag.py
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Original file line number Diff line number Diff line change
Expand Up @@ -391,17 +391,20 @@
'viirs',
]

oz_sensors = [
oz_lay_sensors = [
'gome',
'sbuv2',
'omi',
'ompsnp',
'ompstc8',
'ompslp',
'mls55',
'ompsnm',
]

oz_lev_sensors = [
'ompslp',
'ompslpnc',
'mls55',
]
# units
# 'IODA/UFO_variable_name': 'Unit'
units_values = {
Expand Down Expand Up @@ -1443,6 +1446,7 @@ def __init__(self, filename):
self.filename = filename
splitfname = self.filename.split('/')[-1].split('_')
i = False
oz_sensors = oz_lay_sensors + oz_lev_sensors
for s in oz_sensors:
if s in splitfname:
i = splitfname.index(s)
Expand Down Expand Up @@ -1493,7 +1497,7 @@ def toGeovals(self, OutDir, clobber=True):
ncout.createDimension("nlocs", nlocs)
# other dims
ncout.createDimension("nlevs", self.df.dimensions["mole_fraction_of_ozone_in_air_arr_dim"].size)
if (self.sensor not in ["ompslp", "mls55"]):
if (self.sensor in oz_lay_sensors):
ncout.createDimension("nlevsp1", self.df.dimensions["air_pressure_levels_arr_dim"].size)
for var in self.df.variables.values():
vname = var.name
Expand Down Expand Up @@ -1541,14 +1545,19 @@ def toIODAobs(self, OutDir, clobber=True):

nlocs = self.nobs
vname = "integrated_layer_ozone_in_air"
if (self.sensor in ["ompslp", "mls55"]):
if (self.sensor in oz_lev_sensors):
vname = "mole_fraction_of_ozone_in_air"
varDict[vname]['valKey'] = vname, iconv.OvalName()
varDict[vname]['errKey'] = vname, iconv.OerrName()
varDict[vname]['qcKey'] = vname, iconv.OqcName()
VarDims[vname] = ['nlocs']
varAttrs[varDict[vname]['valKey']]['units'] = 'mol mol-1'
varAttrs[varDict[vname]['errKey']]['units'] = 'mol mol-1'
if (self.sensor in oz_lev_sensors):
varAttrs[varDict[vname]['valKey']]['units'] = 'mol mol-1'
varAttrs[varDict[vname]['errKey']]['units'] = 'mol mol-1'
else:
varAttrs[varDict[vname]['valKey']]['units'] = 'DU'
varAttrs[varDict[vname]['errKey']]['units'] = 'DU'

varAttrs[varDict[vname]['qcKey']]['units'] = 'unitless'
varAttrs[varDict[vname]['valKey']]['_FillValue'] = self.FLOAT_FILL
varAttrs[varDict[vname]['errKey']]['_FillValue'] = self.FLOAT_FILL
Expand Down