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Fix combine obsspace bug #1027

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Merged
PatNichols merged 2 commits into from
Aug 19, 2022
Merged

Fix combine obsspace bug #1027

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3e3f90a
Fix combine obsspace bug
CoryMartin-NOAA Aug 16, 2022
26ea0d2
Merge branch 'develop' into bugfix/geovals
PatNichols Aug 19, 2022
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6 changes: 3 additions & 3 deletions src/gsi-ncdiag/combine_obsspace.py
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Original file line number Diff line number Diff line change
Expand Up @@ -218,12 +218,12 @@ def combine_obsspace(FileList, OutFile, GeoDir):
if v in obsspace.variables:
_var = obsspace.Variable(v)
tmpdata = np.array(_var.read_data())
del _var
else:
tmpdata = np.full((obsspace.nlocs), iconv.get_default_fill_val(GeoVarTypes[v]),
dtype=GeoVarTypes[v])
tmpgeodata.append(tmpdata)
tmpgeoidx.append(np.ones_like(tmpdata).astype(int)*int(idx2))
del _var
del obsspace
tmpgeodata = np.hstack(tmpgeodata)
tmpgeoidx = np.hstack(tmpgeoidx)
Expand All @@ -244,12 +244,12 @@ def combine_obsspace(FileList, OutFile, GeoDir):
if v in obsspace.variables:
_var = obsspace.Variable(v)
tmpdata = np.array(_var.read_data())
del _var
else:
tmpdata = np.full((obsspace.nlocs, nlevs), iconv.get_default_fill_val(GeoVarTypes[v]),
dtype=GeoVarTypes[v])
tmpgeodata.append(tmpdata)
tmpgeoidx.append(np.ones_like(tmpdata).astype(int)*int(idx2))
del _var
del obsspace
tmpgeodata = np.vstack(tmpgeodata)
tmpgeoidx = np.vstack(tmpgeoidx)
Expand All @@ -268,12 +268,12 @@ def combine_obsspace(FileList, OutFile, GeoDir):
if v in obsspace.variables:
_var = obsspace.Variable(v)
tmpdata = np.array(_var.read_data())
del _var
else:
tmpdata = np.full((obsspace.nlocs, ninterfaces), iconv.get_default_fill_val(GeoVarTypes[v]),
dtype=GeoVarTypes[v])
tmpgeodata.append(tmpdata)
tmpgeoidx.append(np.ones_like(tmpdata).astype(int)*int(idx2))
del _var
del obsspace
tmpgeodata = np.vstack(tmpgeodata)
tmpgeoidx = np.vstack(tmpgeoidx)
Expand Down