readded pages

spectre/protocols-cytometry.md

@@ -165,7 +165,7 @@ This protocol page contains reproducible workflows for different types of cytome
           <td style="padding-left:.75em;padding-right:.75em;width:33%; border-left:1px solid #000;border-top:1px solid #000;border-bottom:1px solid #000;border-right:1px solid #000;text-align:center; vertical-align:middle">
               <div style="text-align:center;font-size:large;font-weight:700;">
                   <p style="color:#00003f">
-                      <a href="https://github.com/phipsonlab/SuperCellCyto" target="_blank" rel="noopener noreferrer"><b><span style="font-size: 18px">GO TO SITE</span></b></a>
+                      <a href="https://phipsonlab.github.io/SuperCellCyto/" target="_blank" rel="noopener noreferrer"><b><span style="font-size: 18px">GO TO SITE</span></b></a>
                   </p>
               </div>
           </td>

team/givanna-putri/gp.md

@@ -0,0 +1,33 @@
+---
+layout: page
+title: Givanna Putri - Profile
+permalink: /givanna-putri/
+---
+
+---
+
+<div class='row'>
+    <div class="image">
+        <a href="#">
+            <img src="https://avatars.githubusercontent.com/u/5366317?s=460&u=ac0322d285310461de6ad2a4b938252b6ea2d948&v=4" alt="icon" width="180" align="right" style="padding-left: 10px; padding-right: 0px; padding-top: 10px; padding-bottom: 10px">
+        </a>
+    </div>
+</div>
+
+Givanna Putri is a post-doctoral researcher at Walter and Eliza Hall Institute of Medical Research (WEHI).
+She is a computer scientist, and has extensive experience in developing and applying machine learning (ML) algorithms to analyse multi-omics data.
+Her work focuses heavily on developing and applying ML algorithms to uncover biological insights from multi-omics datasets, including cytometry, scRNAseq, and spatial transcriptomics.
+
+Givanna was awarded her PhD in Computer Science in 2021 from the University of Sydney.
+During her PhD, she developed algorithms to cluster and track cellular populations development in time-course high dimensional cytometry data.
+This included the TrackSOM algorithm which was used to profile [SARS-CoV-2/COVID-19](https://immunedynamics.io/research/disease) patients, and the [ChronoClust](https://github.com/ghar1821/Chronoclust) algorithm which publication on the Knowledge Based System journal won the Dolby scientific paper competition in 2019.
+She also developed a novel benchmarking methodology [ParetoBench](https://github.com/ghar1821/ParetoBench) which uses the Pareto Front framework to fairly compare the performances of clustering algorithms using several performance metrics.
+Her PhD research was funded by The Australian Government Research Training Program Scholarship and The University of Sydney Alumni Scholarship.
+
+In her current role as a postdoc at WEHI, she developed an R package [SuperCellCyto](https://phipsonlab.github.io/SuperCellCyto/) to reduce the size of cytometry data while minimising the loss in biological heterogeneity. 
+She was awarded a travel award by the CASS foundation to present SuperCellCyto at the recent CYTO 2024 conference.  
+
+**Sites and academic profiles**
+
+&nbsp;&nbsp;&nbsp;<img src="https://raw.githubusercontent.com/tomashhurst/tomashhurst.github.io/2a9877aba13f6f7b46b11728a68d7047debb0f36/custom_SVG/Google_Scholar_logo.svg" alt="Logo" width="25"> [Google Scholar](http://scholar.google.com/citations?user=S-sNLPIAAAAJ&hl=en) <br/>
+&nbsp;&nbsp;&nbsp;<img src="https://raw.githubusercontent.com/tomashhurst/tomashhurst.github.io/2a9877aba13f6f7b46b11728a68d7047debb0f36/custom_SVG/GithubSVG.svg" alt="Github logo" width="25"> [Github](https://github.com/ghar1821) <br/>