Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Create a demo of querying OBO in SQL in the browser using sql.js #63

Open
cmungall opened this issue Dec 1, 2022 · 4 comments
Open

Comments

@cmungall
Copy link
Collaborator

cmungall commented Dec 1, 2022

h/t @kltm
https://sql.js.org/#/

@kltm
Copy link

kltm commented Dec 4, 2022

A few thoughts about this:

  • while the file sizes are large, on good internet they are not terrible
  • workers could download a prioritized list in the background
  • there may be new standard browser API settings that could allow this to be locally cached and only updates downloaded?
  • if a subset of OAK commands that are backed by sqlite3 could be ported to JS (manually or wasm), it might make for a nice bit of advertising and playground
  • "federated queries"
  • may be nice to embed as part of tools so new ontology developers could get something braggable up quickly
  • if GO (or anybody else, i.e. OBO) produced sqlite3 files as part of the distro, something like this could easily be embedded to make an easy per-release playground
  • "GOOSE"

@kltm
Copy link

kltm commented Dec 5, 2022

@kltm
Copy link

kltm commented Dec 5, 2022

@cmungall Now all ontologies: https://go-public.s3.amazonaws.com/db.html

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants