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5 lisa new independent recovery analysis #8

5 lisa new independent recovery analysis

5 lisa new independent recovery analysis #8

Workflow file for this run

name: Publish Conda package
on:
release:
types:
- published
pull_request:
jobs:
publish:
name: Build and publish conda packages
runs-on: ubuntu-latest
# need for activated env
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v2
- name: get release info
id: release_info
run: |
if [ "${{ github.event.release.tag_name }}" != "" ]; then
version=$(echo ${{ github.event.release.tag_name }} | sed 's/^v//')
else
version="$(awk -F= '/^PACKAGE_VERSION/ { print $2}' pyincore_incubator/globals.py | sed 's/[ "]//g').${{ github.run_number }}"
fi
echo "VERSION=${version}" >> $GITHUB_ENV
echo "VERSION=${version}"
./version.sh ${version}
testing=$(echo $version | sed 's/[0-9\.]//g')
if [ "$testing" == "" ]; then
echo "LABEL=main" >> $GITHUB_ENV
else
echo "LABEL=rc" >> $GITHUB_ENV
fi
- name: Cache conda
uses: actions/cache@v2
env:
# Increase this value to reset cache if environment.yml has not changed
CACHE_NUMBER: 0
with:
path: ~/conda_pkgs_dir
key:
${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ hashFiles('environment.yml') }}
- name: Install micromamba
uses: mamba-org/setup-micromamba@v1
with:
create-args: >-
python=3.9
conda
environment-file: environment.yml
generate-run-shell: true
condarc: |
channels:
- in-core
- conda-forge
- defaults
- name: Build conda package
run: |
conda install conda-build
mkdir dist
conda build --output-folder dist \
--label ${{ env.LABEL }} \
recipes
- name: Upload conda package
if: github.event_name == 'release'
run: |
conda install -y anaconda-client
anaconda --token ${{ secrets.CONDA_INCORE_TOKEN }} upload \
--user IN-CORE \
--label ${{ env.LABEL }} \
dist/*/pyincore-incubator-${{ env.VERSION }}-*.tar.bz2
- name: Upload binaries to release
if: github.event_name == 'release'
uses: svenstaro/upload-release-action@v2
with:
repo_token: ${{ secrets.GITHUB_TOKEN }}
file: dist/*/pyincore-incubator-${{ env.VERSION }}-*.tar.bz2
file_glob: true
overwrite: true