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latest docker tag works fine
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HadrienG committed Dec 17, 2018
1 parent f5a39d8 commit 5a985b4
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -33,7 +33,7 @@ pip install InSilicoSeq
Alternatively, with docker:

```shell
docker pull hadrieng/insilicoseq:1.3.2
docker pull hadrieng/insilicoseq:latest
```

For more installation options, please refer to the full [documentation](http://insilicoseq.readthedocs.io)
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4 changes: 2 additions & 2 deletions doc/iss/install.rst
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Expand Up @@ -63,15 +63,15 @@ If you wish to use InSilicoSeq using docker

.. code-block:: bash
docker pull hadrieng/insilicoseq:1.3.2
docker pull hadrieng/insilicoseq:latest
To use InSilicoSeq with docker, you need to provide a `volume` to the ``docker run`` command.
Given with the ``-v`` option, the volume is your way of exchanging data (in this case, your input and output files) with the docker container.

.. code-block:: bash
docker run -v /Users/hadrien/data:/mnt/data -it --rm \
hadrieng/insilicoseq:1.3.2 iss generate \
hadrieng/insilicoseq iss generate \
--genomes /mnt/data/genomes.fasta -m miseq \
-o /mnt/data/reads
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