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@HUPO-PSI

HUPO Proteomics Standards Initiative

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  1. mzTab mzTab Public

    mzTab Reporting MS-based Proteomics and Metabolomics Results

    Java 41 17

  2. mzQC mzQC Public

    Reporting and exchange format for mass spectrometry quality control data

    Dockerfile 31 13

  3. psi-ms-CV psi-ms-CV Public

    HUPO-PSI mass spectrometry CV

    Python 30 38

  4. mzML mzML Public

    Repository for mzML and the corresponding examples

    Java 29 16

  5. mzSpecLib mzSpecLib Public

    mzSpecLib: A standard format to exchange/distribute spectral libraries

    Python 26 14

  6. mzIdentML mzIdentML Public

    Repository for mzIdentML and the corresponding examples

    HTML 24 24

Repositories

Showing 10 of 26 repositories
  • mzQC Public

    Reporting and exchange format for mass spectrometry quality control data

    HUPO-PSI/mzQC’s past year of commit activity
    Dockerfile 31 CC-BY-4.0 13 37 (1 issue needs help) 2 Updated Apr 3, 2025
  • mzTab Public

    mzTab Reporting MS-based Proteomics and Metabolomics Results

    HUPO-PSI/mzTab’s past year of commit activity
    Java 41 17 35 (3 issues need help) 8 Updated Apr 1, 2025
  • mzPAF Public

    mzPAF Peak Annotation Format

    HUPO-PSI/mzPAF’s past year of commit activity
    Jupyter Notebook 3 CC0-1.0 3 0 0 Updated Mar 28, 2025
  • psi-ms-CV Public

    HUPO-PSI mass spectrometry CV

    HUPO-PSI/psi-ms-CV’s past year of commit activity
    Python 30 38 4 0 Updated Feb 28, 2025
  • mzspeclib-py Public

    A python reference implementation of the mzSpecLib spectral library format

    HUPO-PSI/mzspeclib-py’s past year of commit activity
    Python 5 Apache-2.0 1 1 0 Updated Jan 10, 2025
  • psi-mi-CV Public

    Molecular Interactions Controll Vocabulary

    HUPO-PSI/psi-mi-CV’s past year of commit activity
    4 CC-BY-4.0 4 13 0 Updated Nov 29, 2024
  • mzSpecLib Public

    mzSpecLib: A standard format to exchange/distribute spectral libraries

    HUPO-PSI/mzSpecLib’s past year of commit activity
    Python 26 Apache-2.0 14 5 0 Updated Nov 9, 2024
  • miTab Public

    Molecular Interactions Tab-delimited format

    HUPO-PSI/miTab’s past year of commit activity
    4 0 0 0 Updated Oct 29, 2024
  • hupo-psi.github.io Public

    Landing site for GitHub Pages

    HUPO-PSI/hupo-psi.github.io’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Sep 6, 2024
  • psi-tools Public

    Previous https://sourceforge.net/p/psidev/svn/HEAD/tree/psi/tools/ folder

    HUPO-PSI/psi-tools’s past year of commit activity
    Java 2 2 1 0 Updated Aug 15, 2024
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