Fix: logging #77.

GooglingTheCancerGenome · Dec 2, 2020 · 02e22f0 · 02e22f0
1 parent ce98aca
commit 02e22f0
Showing 1 changed file with 6 additions and 3 deletions.
diff --git a/scripts/genome_wide/label_windows.py b/scripts/genome_wide/label_windows.py
@@ -309,9 +309,12 @@ def overlap(svtype, sv_list, cpos_list, win_hlen, ground_truth, outDir):
             labels[pos_id] = 'no'+svtype
 
     logging.info(Counter(labels.values()))
-    sv_coverage = int(len(sv_covered) / len(sv_list) * 100)
-    logging.info('SV coverage: {}/{}={}%'.format(len(sv_covered), len(sv_list),
-                                                 sv_coverage))
+
+    try:
+        sv_coverage = int(len(sv_covered) / len(sv_list) * 100)
+    except ZeroDivisionError:
+        sv_coverage = 0
+    logging.info("SV coverage: %d%%" % sv_coverage)
 
     filename, file_extension = os.path.splitext(ground_truth)