Migrate to Miniforge

.gitignore

@@ -8,3 +8,6 @@
 Anaconda2/
 Anaconda3/
 Miniconda2/
+xor*
+tmp-for-ffnet/
+*.png

CHANGELOG.md

@@ -11,19 +11,43 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ### Changed
 
-- Update to Miniconda version to 24.5.0-0
+### Added
+
+### Removed
+
+### Deprecated
+
+## [24.7.0] - 2024-09-10
+
+### Changed
+
+- Migrated to use Miniforge instead of Miniconda
+- "Update" to Miniforge version to 24.7.1-0
+  - Note: Miniforge is often behind Miniconda in version numbers, so this is not a downgrade, but rather
+    the latest version of Miniforge
 - Make a symlink of `f2py` to `f2py3` to fix an issue with the wrong `f2py` being found sometimes on discover
+- Update both `.condarc` and `.mambarc` to use the `conda-forge` channel as the default channel
+- Add a test at the end to ensure no `defaults` channel packages are installed
+- Add `-ffnet-hack` for a hack to install `ffnet` on bucy (nothing else seems to need it)
+  - This flag uses a fork of ffnet with hardcoded references to gfortran
 
 ### Added
 
-- Explicit Conda Packages
+- Explicit Mamba Packages
   - uxarray
 - Explicit Pip Packages
   - basemap
+  - redis (moved from Mamba to Pip)
+- Added basemap example
 
 ### Removed
 
-### Deprecated
+- Removed `--conda` option
+- Explicit Mamba Packages
+  - redis (moved from Mamba to Pip)
+  - redis-py (seems not to exist in the conda-forge channel or in PyPI)
+  - sphinxcontrib (seems not to exist in the conda-forge channel or in PyPI)
+  - get_terminal_size (built-in to Python 3.3+ in the `shutil` module)
 
 ## [24.4.0] - 2024-05-30
 

Miniconda3/.gitignore → Miniforge3/.gitignore

@@ -1,3 +1,6 @@
 *.log
 pygrads-3.0.b1/
 Miniconda?-*.sh
+Miniforge?-*.sh
+Mambaforge?-*.sh
+

README.md

@@ -5,14 +5,16 @@
 GEOSpyD is the "GEOS Python Distribution". It is a collection of many, many packages that was inherited from SIVOpyD, a set of
 scripts for installing Python maintained by @JulesKouatchou.
 
-We do not
+This script now uses Miniforge and restricts the installation to use `conda-forge` and `nodefaults` as the channels. Moreover,
+to prevent infection from the Anaconda `defaults` channel, the script at the end checks the output of `mamba list` to make sure no
+`defaults` packages appear. If they do, the script will exit with an error message.
 
 ## Installation
 
 In order to use the install script, you can run:
 
 ```
-./install_miniconda.bash --python_version 3.12 --miniconda_version 24.5.0-0 --prefix /opt/GEOSpyD
+./install_miniforge.bash --python_version 3.12 --miniforge_version 24.5.0-0 --prefix /opt/GEOSpyD
 ```
 
 will create an install at:
@@ -26,35 +28,36 @@ the stack is re-installed, the previous install is not overwritten.
 ## Usage
 
 ```
-Usage: ./install_miniconda.bash --python_version <python version> --miniconda_version <miniconda_version> --prefix <prefix> [--conda]
+Usage: ./install_miniforge.bash --python_version <python version> --miniforge_version <miniforge> --prefix <prefix> [--micromamba | --mamba] [--blas <blas>]
 
    Required arguments:
       --python_version <python version> (e.g., 3.12)
-      --miniconda_version <miniconda_version version> (e.g., 24.5.0-0)
+      --miniforge_version <miniforge_version version> (e.g., 24.5.0-0)
       --prefix <full path to installation directory> (e.g, /opt/GEOSpyD)
 
    Optional arguments:
       --blas <blas> (default: accelerate, options: mkl, openblas, accelerate, blis)
       --micromamba: Use micromamba installer (default)
       --mamba: Use mamba installer
-      --conda: Use conda installer (NOT recommended, only for legacy support)
       --help: Print this message
 
    By default we use the micromamba installer on both Linux and macOS
    For BLAS, we use accelerate on macOS and MKL on Linux
 
    NOTE 1: This script installs within /opt/GEOSpyD with a path based on:
 
-        1. The Miniconda version
+        1. The Miniforge version
         2. The Python version
         3. The date of the installation
 
-   For example: ./install_miniconda.bash --python_version 3.12 --miniconda_version 24.5.0-0 --prefix /opt/GEOSpyD
+   For example: ./install_miniforge.bash --python_version 3.12 --miniforge_version 24.5.0-0 --prefix /opt/GEOSpyD
 
    will create an install at:
-       /opt/GEOSpyD/24.5.0-0_py3.12/2024-03-08
+       /opt/GEOSpyD/24.5.0-0_py3.12/2024-08-29
 
-  NOTE 2: This script will create or substitute a .condarc file in the user's home directory.
-          If you have an existing .condarc file, it will be restored after installation.
-          We do this to ensure that the installation uses conda-forge as the default channel.
+  NOTE 2: This script will create or substitute a .mambarc
+  and .condarc file in the user's home directory.  If you
+  have an existing .mambarc and/or .condarc file, it will be
+  restored after installation.  We do this to ensure that the
+  installation uses conda-forge as the default channel.
 ```