Skip to content

Commit

Permalink
perf: autobump bio/whatshap/haplotag (snakemake#2934)
Browse files Browse the repository at this point in the history
Automatic bump of bio/whatshap/haplotag.

---------

Co-authored-by: snakedeploy-bot[bot] <115615832+snakedeploy-bot[bot]@users.noreply.github.com>
  • Loading branch information
snakedeploy-bot[bot] authored and Vito Zanotelli committed Jun 22, 2024
1 parent 9c2fc27 commit 4cefad1
Show file tree
Hide file tree
Showing 2 changed files with 39 additions and 38 deletions.
75 changes: 38 additions & 37 deletions bio/whatshap/haplotag/environment.linux-64.pin.txt
Original file line number Diff line number Diff line change
Expand Up @@ -4,75 +4,76 @@
@EXPLICIT
https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81
https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2024.2.2-hbcca054_0.conda#2f4327a1cbe7f022401b236e915a5fef
https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.40-h41732ed_0.conda#7aca3059a1729aa76c597603f10b0dd3
https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-13.2.0-h7e041cc_5.conda#f6f6600d18a4047b54f803cf708b868a
https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.40-h55db66e_0.conda#10569984e7db886e4f1abc2b47ad79a1
https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-13.2.0-hc0a3c3a_7.conda#53ebd4c833fa01cb2c6353e99f905406
https://conda.anaconda.org/conda-forge/linux-64/python_abi-3.10-4_cp310.conda#26322ec5d7712c3ded99dd656142b8ce
https://conda.anaconda.org/conda-forge/noarch/tzdata-2023d-h0c530f3_0.conda#8dee24b8be2d9ff81e7bd4d7d97ff1b0
https://conda.anaconda.org/conda-forge/linux-64/libgomp-13.2.0-h807b86a_5.conda#d211c42b9ce49aee3734fdc828731689
https://conda.anaconda.org/conda-forge/noarch/tzdata-2024a-h0c530f3_0.conda#161081fc7cec0bfda0d86d7cb595f8d8
https://conda.anaconda.org/conda-forge/linux-64/libgomp-13.2.0-h77fa898_7.conda#abf3fec87c2563697defa759dec3d639
https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2#73aaf86a425cc6e73fcf236a5a46396d
https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-13.2.0-h807b86a_5.conda#d4ff227c46917d3b4565302a2bbb276b
https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-13.2.0-h77fa898_7.conda#72ec1b1b04c4d15d4204ece1ecea5978
https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-hd590300_5.conda#69b8b6202a07720f448be700e300ccf4
https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.26.0-hd590300_0.conda#a86d90025198fd411845fc245ebc06c8
https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.28.1-hd590300_0.conda#dcde58ff9a1f30b0037a2315d1846d1f
https://conda.anaconda.org/conda-forge/linux-64/isa-l-2.31.0-hd590300_1.conda#61a9d1aae1213962a3d75e9d817f8a78
https://conda.anaconda.org/conda-forge/linux-64/keyutils-1.6.1-h166bdaf_0.tar.bz2#30186d27e2c9fa62b45fb1476b7200e3
https://conda.anaconda.org/conda-forge/linux-64/libdeflate-1.18-h0b41bf4_0.conda#6aa9c9de5542ecb07fdda9ca626252d8
https://conda.anaconda.org/conda-forge/linux-64/libev-4.33-hd590300_2.conda#172bf1cd1ff8629f2b1179945ed45055
https://conda.anaconda.org/conda-forge/linux-64/libffi-3.4.2-h7f98852_5.tar.bz2#d645c6d2ac96843a2bfaccd2d62b3ac3
https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-13.2.0-ha4646dd_5.conda#7a6bd7a12a4bd359e2afe6c0fa1acace
https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-13.2.0-hca663fb_7.conda#c0bd771f09a326fdcd95a60b617795bf
https://conda.anaconda.org/conda-forge/linux-64/libnsl-2.0.1-hd590300_0.conda#30fd6e37fe21f86f4bd26d6ee73eeec7
https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.38.1-h0b41bf4_0.conda#40b61aab5c7ba9ff276c41cfffe6b80b
https://conda.anaconda.org/conda-forge/linux-64/libxcrypt-4.4.36-hd590300_1.conda#5aa797f8787fe7a17d1b0821485b5adc
https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.2.13-hd590300_5.conda#f36c115f1ee199da648e0597ec2047ad
https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.4-h59595ed_2.conda#7dbaa197d7ba6032caf7ae7f32c1efa0
https://conda.anaconda.org/conda-forge/linux-64/openssl-3.2.1-hd590300_0.conda#51a753e64a3027bd7e23a189b1f6e91e
https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.5-h59595ed_0.conda#fcea371545eda051b6deafb24889fc69
https://conda.anaconda.org/conda-forge/linux-64/openssl-3.3.0-hd590300_0.conda#c0f3abb4a16477208bbd43a39bd56f18
https://conda.anaconda.org/conda-forge/linux-64/xz-5.2.6-h166bdaf_0.tar.bz2#2161070d867d1b1204ea749c8eec4ef0
https://conda.anaconda.org/conda-forge/linux-64/zlib-ng-2.0.7-h0b41bf4_0.conda#49e8329110001f04923fe7e864990b0c
https://conda.anaconda.org/conda-forge/linux-64/libedit-3.1.20191231-he28a2e2_2.tar.bz2#4d331e44109e3f0e19b4cb8f9b82f3e1
https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-13.2.0-h69a702a_5.conda#e73e9cfd1191783392131e6238bdb3e9
https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-13.2.0-h69a702a_7.conda#1b84f26d9f4f6026e179e7805d5a15cd
https://conda.anaconda.org/conda-forge/linux-64/libnghttp2-1.58.0-h47da74e_1.conda#700ac6ea6d53d5510591c4344d5c989a
https://conda.anaconda.org/conda-forge/linux-64/libsqlite-3.44.2-h2797004_0.conda#3b6a9f225c3dbe0d24f4fedd4625c5bf
https://conda.anaconda.org/conda-forge/linux-64/libsqlite-3.45.3-h2797004_0.conda#b3316cbe90249da4f8e84cd66e1cc55b
https://conda.anaconda.org/conda-forge/linux-64/libssh2-1.11.0-h0841786_0.conda#1f5a58e686b13bcfde88b93f547d23fe
https://conda.anaconda.org/conda-forge/linux-64/pbzip2-1.1.13-h1fcc475_2.conda#e1bf3c0868789f3ddf5d1aeb47bc60a6
https://conda.anaconda.org/conda-forge/linux-64/pigz-2.8-h2797004_0.conda#1832561770273ca7cf52b989dd83e6c3
https://conda.anaconda.org/conda-forge/linux-64/readline-8.2-h8228510_1.conda#47d31b792659ce70f470b5c82fdfb7a4
https://conda.anaconda.org/conda-forge/linux-64/tk-8.6.13-noxft_h4845f30_101.conda#d453b98d9c83e71da0741bb0ff4d76bc
https://conda.anaconda.org/conda-forge/linux-64/zlib-1.2.13-hd590300_5.conda#68c34ec6149623be41a1933ab996a209
https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.5-hfc55251_0.conda#04b88013080254850d6c01ed54810589
https://conda.anaconda.org/conda-forge/linux-64/krb5-1.21.2-h659d440_0.conda#cd95826dbd331ed1be26bdf401432844
https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.26-pthreads_h413a1c8_0.conda#760ae35415f5ba8b15d09df5afe8b23a
https://conda.anaconda.org/conda-forge/linux-64/python-3.10.13-hd12c33a_1_cpython.conda#ed38140af93f81319ebc472fbcf16cca
https://conda.anaconda.org/conda-forge/linux-64/docutils-0.20.1-py310hff52083_3.conda#c159dcd29bbd80b187b1c5d5f73cc971
https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-21_linux64_openblas.conda#0ac9f44fc096772b0aa092119b00c3ca
https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.5.0-hca28451_0.conda#7144d5a828e2cae218e0e3c98d8a0aeb
https://conda.anaconda.org/conda-forge/noarch/networkx-3.2.1-pyhd8ed1ab_0.conda#425fce3b531bed6ec3c74fab3e5f0a1c
https://conda.anaconda.org/conda-forge/noarch/packaging-23.2-pyhd8ed1ab_0.conda#79002079284aa895f883c6b7f3f88fd6
https://conda.anaconda.org/conda-forge/noarch/pycparser-2.21-pyhd8ed1ab_0.tar.bz2#076becd9e05608f8dc72757d5f3a91ff
https://conda.anaconda.org/conda-forge/noarch/pyparsing-3.1.1-pyhd8ed1ab_0.conda#176f7d56f0cfe9008bdf1bccd7de02fb
https://conda.anaconda.org/conda-forge/linux-64/python-isal-1.5.3-py310h2372a71_0.conda#b172f71aff8d45e9beb8319e4f72ff19
https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.27-pthreads_h413a1c8_0.conda#a356024784da6dfd4683dc5ecf45b155
https://conda.anaconda.org/conda-forge/linux-64/python-3.10.14-hd12c33a_0_cpython.conda#2b4ba962994e8bd4be9ff5b64b75aff2
https://conda.anaconda.org/conda-forge/noarch/docutils-0.21.2-pyhd8ed1ab_0.conda#e8cd5d629f65bdf0f3bb312cde14659e
https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-22_linux64_openblas.conda#1a2a0cd3153464fee6646f3dd6dad9b8
https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.7.1-hca28451_0.conda#755c7f876815003337d2c61ff5d047e5
https://conda.anaconda.org/conda-forge/noarch/networkx-3.3-pyhd8ed1ab_1.conda#d335fd5704b46f4efb89a6774e81aef0
https://conda.anaconda.org/conda-forge/noarch/packaging-24.0-pyhd8ed1ab_0.conda#248f521b64ce055e7feae3105e7abeb8
https://conda.anaconda.org/conda-forge/noarch/pycparser-2.22-pyhd8ed1ab_0.conda#844d9eb3b43095b031874477f7d70088
https://conda.anaconda.org/conda-forge/noarch/pyparsing-3.1.2-pyhd8ed1ab_0.conda#b9a4dacf97241704529131a0dfc0494f
https://conda.anaconda.org/conda-forge/linux-64/python-isal-1.6.1-py310h2372a71_0.conda#f2db755b0b01578e0364dfd199980269
https://conda.anaconda.org/conda-forge/linux-64/python-zlib-ng-0.4.3-py310ha5dcb8a_0.conda#9fd64be99ef6c4b2203923030fd9c7f2
https://conda.anaconda.org/bioconda/noarch/pyvcf3-1.0.3-pyhdfd78af_0.tar.bz2#2471bf4fad9f15602ad24164adf1a22a
https://conda.anaconda.org/conda-forge/noarch/setuptools-69.0.3-pyhd8ed1ab_0.conda#40695fdfd15a92121ed2922900d0308b
https://conda.anaconda.org/conda-forge/noarch/setuptools-69.5.1-pyhd8ed1ab_0.conda#7462280d81f639363e6e63c81276bd9e
https://conda.anaconda.org/conda-forge/noarch/six-1.16.0-pyh6c4a22f_0.tar.bz2#e5f25f8dbc060e9a8d912e432202afc2
https://conda.anaconda.org/conda-forge/noarch/wheel-0.42.0-pyhd8ed1ab_0.conda#1cdea58981c5cbc17b51973bcaddcea7
https://conda.anaconda.org/conda-forge/noarch/wheel-0.43.0-pyhd8ed1ab_1.conda#0b5293a157c2b5cd513dd1b03d8d3aae
https://conda.anaconda.org/conda-forge/noarch/zipp-3.17.0-pyhd8ed1ab_0.conda#2e4d6bc0b14e10f895fc6791a7d9b26a
https://conda.anaconda.org/conda-forge/noarch/amply-0.1.6-pyhd8ed1ab_0.conda#a45a9cc65a438f465845ebff49c6fbf9
https://conda.anaconda.org/conda-forge/linux-64/cffi-1.16.0-py310h2fee648_0.conda#45846a970e71ac98fd327da5d40a0a2c
https://conda.anaconda.org/bioconda/linux-64/htslib-1.19.1-h81da01d_1.tar.bz2#b9079488b80860a65251c7da671e370f
https://conda.anaconda.org/conda-forge/noarch/importlib-metadata-7.0.1-pyha770c72_0.conda#746623a787e06191d80a2133e5daff17
https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.9.0-21_linux64_openblas.conda#4a3816d06451c4946e2db26b86472cb6
https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.9.0-21_linux64_openblas.conda#1a42f305615c3867684e049e85927531
https://conda.anaconda.org/conda-forge/noarch/pip-23.3.2-pyhd8ed1ab_0.conda#8591c748f98dcc02253003533bc2e4b1
https://conda.anaconda.org/bioconda/linux-64/pysam-0.22.0-py310h41dec4a_0.tar.bz2#a006237db7a1f3313b0e40945727e7b2
https://conda.anaconda.org/conda-forge/linux-64/liblapacke-3.9.0-21_linux64_openblas.conda#854c3c762b25ccfbaa1aa24ee34288e3
https://conda.anaconda.org/conda-forge/linux-64/numpy-1.26.3-py310hb13e2d6_0.conda#e5e9c6f112d581cdf465b8ca861cb14f
https://conda.anaconda.org/bioconda/linux-64/htslib-1.20-h81da01d_0.tar.bz2#1084947eefd2bbe9c1f84ca24061a9d5
https://conda.anaconda.org/conda-forge/noarch/importlib-metadata-7.1.0-pyha770c72_0.conda#0896606848b2dc5cebdf111b6543aa04
https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.9.0-22_linux64_openblas.conda#4b31699e0ec5de64d5896e580389c9a1
https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.9.0-22_linux64_openblas.conda#b083767b6c877e24ee597d93b87ab838
https://conda.anaconda.org/conda-forge/noarch/pip-24.0-pyhd8ed1ab_0.conda#f586ac1e56c8638b64f9c8122a7b8a67
https://conda.anaconda.org/bioconda/linux-64/pysam-0.22.1-py310h41dec4a_0.tar.bz2#9fc6ea7459099de6ece0743e5bfa4f48
https://conda.anaconda.org/conda-forge/linux-64/liblapacke-3.9.0-22_linux64_openblas.conda#1fd156abd41a4992835952f6f4d951d0
https://conda.anaconda.org/conda-forge/linux-64/numpy-1.26.4-py310hb13e2d6_0.conda#6593de64c935768b6bad3e19b3e978be
https://conda.anaconda.org/conda-forge/linux-64/zstandard-0.22.0-py310h1275a96_0.conda#54698ba13cd3494547b289cd86a2176a
https://conda.anaconda.org/conda-forge/linux-64/biopython-1.83-py310h2372a71_0.conda#0128595946cebfaaf212cc45d4b9cd3c
https://conda.anaconda.org/conda-forge/linux-64/coin-or-utils-2.11.9-hee58242_0.conda#0f5e6a4d88aac3fa5fcd2fa929862711
https://conda.anaconda.org/conda-forge/linux-64/scipy-1.12.0-py310hb13e2d6_2.conda#cd3baec470071490bc5ab05da64c52b5
https://conda.anaconda.org/conda-forge/linux-64/xopen-1.9.0-py310hff52083_0.conda#490a6de0f1986ac5aa7469b698d9722b
https://conda.anaconda.org/conda-forge/linux-64/coin-or-osi-0.108.8-ha2443b9_0.conda#7e4adb609b8bf87746d6fab1062348c8
https://conda.anaconda.org/conda-forge/linux-64/coin-or-utils-2.11.11-hee58242_0.conda#d213208e4e3e68877b47b90ad512a95e
https://conda.anaconda.org/conda-forge/linux-64/scipy-1.13.0-py310h93e2701_1.conda#4a9ff9702042bbccfe40c8bdacb479fa
https://conda.anaconda.org/conda-forge/linux-64/xopen-2.0.1-py310hff52083_0.conda#cf710deac59046a16a72e81fce7a2b9c
https://conda.anaconda.org/conda-forge/linux-64/coin-or-osi-0.108.10-haf5fa05_0.conda#31465c0cbac3c466b9915563147e21bb
https://conda.anaconda.org/bioconda/noarch/pyfaidx-0.8.1.1-pyhdfd78af_0.tar.bz2#af3ab300be5e1a5eaa934daee4a63616
https://conda.anaconda.org/conda-forge/linux-64/coin-or-clp-1.17.8-h1ee7a9c_0.conda#a2d4935dc3955aa906c17136039db06c
https://conda.anaconda.org/conda-forge/linux-64/coin-or-cgl-0.60.7-h516709c_0.conda#9170a2b48868d5a340d7076979a775f8
https://conda.anaconda.org/conda-forge/linux-64/coin-or-cbc-2.10.10-h9002f0b_0.conda#f004ee86906bc133df1775e4b3be00ce
https://conda.anaconda.org/conda-forge/noarch/coincbc-2.10.10-0_metapackage.conda#f1170e44b26962b3e8adade2dd0f3902
https://conda.anaconda.org/conda-forge/linux-64/pulp-2.8.0-py310hff52083_0.conda#b88ca400c2997e9709491e3be9facadf
https://conda.anaconda.org/bioconda/linux-64/whatshap-2.2-py310h0dbaff4_0.tar.bz2#4c70f5a77cbb3fcc776c7a285e7626d4
https://conda.anaconda.org/bioconda/linux-64/whatshap-2.3-py310h0dbaff4_0.tar.bz2#6f945853984f2444f4feaa1b973a97e0
2 changes: 1 addition & 1 deletion bio/whatshap/haplotag/environment.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -3,4 +3,4 @@ channels:
- bioconda
- nodefaults
dependencies:
- whatshap =2.2
- whatshap =2.3

0 comments on commit 4cefad1

Please sign in to comment.