Merge pull request #385 from rhiever/development

TPOT 0.7 release

.gitignore

@@ -75,3 +75,5 @@ docs/sources/examples/.Rhistory
 analyze-oj2-tpot-mdr.ipynb
 
 tpot-mdr-demo.ipynb
+
+github.com/

.travis.yml

@@ -5,9 +5,9 @@ env:
   matrix:
     # let's start simple:
     - PYTHON_VERSION="2.7" LATEST="true"
-    - PYTHON_VERSION="3.4" LATEST="true"
-    - PYTHON_VERSION="3.5" COVERAGE="true" LATEST="true" "DEAP_VERSION=1.0.1" "XGBOOST_VERSION=0.4a30"
     - PYTHON_VERSION="3.5" LATEST="true"
+    - PYTHON_VERSION="3.6" COVERAGE="true" LATEST="true" "DEAP_VERSION=1.0.2" "XGBOOST_VERSION=0.6"
+    - PYTHON_VERSION="3.6" LATEST="true"
 install: source ./ci/.travis_install.sh
 script: bash ./ci/.travis_test.sh
 after_success:

MANIFEST.in

@@ -1,3 +1,3 @@
-include README.md LICENSE tests.py
+include README.md LICENSE tests.py tests.csv
 recursive-include images *
 recursive-include tpot *.py

README.md

@@ -143,7 +143,7 @@ exported_pipeline.fit(training_features, training_classes)
 results = exported_pipeline.predict(testing_features)
 ```
 
-Check the documentation for [more examples and tutorials](http://rhiever.github.io/tpot/examples/MNIST_Example/).
+Check the documentation for [more examples and tutorials](http://rhiever.github.io/tpot/examples/).
 
 ## Contributing to TPOT
 

ci/.travis_install.sh

@@ -53,6 +53,7 @@ fi
 
 pip install update_checker
 pip install tqdm
+pip install pathos
 
 if [[ "$COVERAGE" == "true" ]]; then
     pip install coverage coveralls
@@ -67,4 +68,5 @@ python -c "import deap; print('deap %s' % deap.__version__)"
 python -c "import xgboost; print('xgboost %s ' % xgboost.__version__)"
 python -c "import update_checker; print('update_checker %s' % update_checker.__version__)"
 python -c "import tqdm; print('tqdm %s' % tqdm.__version__)"
+python -c "import pathos; print('pathos %s' % pathos.__version__)"
 python setup.py build_ext --inplace

ci/.travis_test.sh

@@ -17,6 +17,7 @@ python -c "import deap; print('deap %s' % deap.__version__)"
 python -c "import xgboost; print('xgboost %s ' % xgboost.__version__)"
 python -c "import update_checker; print('update_checker %s ' % update_checker.__version__)"
 python -c "import tqdm; print('tqdm %s' % tqdm.__version__)"
+python -c "import pathos; print('pathos %s' % pathos.__version__)"
 
 if [[ "$COVERAGE" == "true" ]]; then
     nosetests -s -v --with-coverage

docs/citing/index.html

@@ -45,95 +45,50 @@
 
       <div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="main navigation">
 	<ul class="current">
+
 
-            <li>
-    <li class="toctree-l1 ">
-        <a class="" href="..">Home</a>
-
-    </li>
-<li>
+            <li class="toctree-l1">
+
+    <a class="" href="..">Home</a>
+	    </li>
 
-            <li>
-    <li class="toctree-l1 ">
-        <a class="" href="../installing/">Installation</a>
-
-    </li>
-<li>
+            <li class="toctree-l1">
+
+    <a class="" href="../installing/">Installation</a>
+	    </li>
 
-            <li>
-    <li class="toctree-l1 ">
-        <a class="" href="../using/">Using TPOT</a>
-
-    </li>
-<li>
+            <li class="toctree-l1">
+
+    <a class="" href="../using/">Using TPOT</a>
+	    </li>
 
-            <li>
-    <ul class="subnav">
-    <li><span>Examples</span></li>
-
-
-
-    <li class="toctree-l1 ">
-        <a class="" href="../examples/MNIST_Example/">MNIST Example</a>
-
-    </li>
-
-
-
-    <li class="toctree-l1 ">
-        <a class="" href="../examples/IRIS_Example/">IRIS Example</a>
-
-    </li>
-
-
-
-    <li class="toctree-l1 ">
-        <a class="" href="../examples/Boston_Example/">Boston Example</a>
-
-    </li>
-
-
-
-    <li class="toctree-l1 ">
-        <a class="" href="../examples/Titanic_Kaggle_Example/">Titanic Kaggle Example</a>
-
-    </li>
-
-
-    </ul>
-<li>
+            <li class="toctree-l1">
+
+    <a class="" href="../examples/">Examples</a>
+	    </li>
 
-            <li>
-    <li class="toctree-l1 ">
-        <a class="" href="../contributing/">Contributing</a>
-
-    </li>
-<li>
+            <li class="toctree-l1">
+
+    <a class="" href="../contributing/">Contributing</a>
+	    </li>
 
-            <li>
-    <li class="toctree-l1 ">
-        <a class="" href="../releases/">Release Notes</a>
-
-    </li>
-<li>
+            <li class="toctree-l1">
+
+    <a class="" href="../releases/">Release Notes</a>
+	    </li>
 
-            <li>
-    <li class="toctree-l1 current">
-        <a class="current" href="./">Citing</a>
-
-            <ul>
+            <li class="toctree-l1 current">
+
+    <a class="current" href="./">Citing</a>
+    <ul class="subnav">
 
-            </ul>
-
-    </li>
-<li>
+    </ul>
+	    </li>
 
-            <li>
-    <li class="toctree-l1 ">
-        <a class="" href="../support/">Support</a>
-
-    </li>
-<li>
+            <li class="toctree-l1">
+
+    <a class="" href="../support/">Support</a>
+	    </li>
 
         </ul>
       </div>
@@ -230,7 +185,7 @@
   <div role="contentinfo">
     <!-- Copyright etc -->
 
-      <p>Copyright &copy; 2016-Present <a href="http://www.randalolson.com">Randal S. Olson</a></p>
+      <p>Copyright &copy; 2015-Present <a href="http://www.randalolson.com">Randal S. Olson</a></p>
 
   </div>
 
@@ -247,7 +202,7 @@
   <div class="rst-versions" role="note" style="cursor: pointer">
     <span class="rst-current-version" data-toggle="rst-current-version">
 
-          <a href="https://github.com/rhiever/tpot" class="icon icon-github" style="float: left; color: #fcfcfc"> GitHub</a>
+          <a href="https://github.com/rhiever/tpot" class="fa fa-github" style="float: left; color: #fcfcfc"> GitHub</a>
 
 
         <span><a href="../releases/" style="color: #fcfcfc;">&laquo; Previous</a></span>