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act_test.yaml
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name: act_test
on:
workflow_dispatch:
# push:
# paths-ignore:
# - '**.nix'
# - 'flake.lock'
# pull_request:
# paths-ignore:
# - '**.nix'
# - 'flake.lock'
concurrency: act_test-${{ github.ref }}
jobs:
ubuntu:
# For available GitHub-hosted runners, see:
# https://docs.github.com/en/actions/using-github-hosted-runners/about-github-hosted-runners
runs-on: ${{ matrix.os }}
name: ${{ matrix.os }} (${{ matrix.compiler }} ${{ matrix.mpi }} MPI ${{ matrix.openmp }} OpenMP)
strategy:
# Allow other runners in the matrix to continue if some fail
fail-fast: false
matrix:
os: [ubuntu-24.04]
compiler: [gcc]
mpi: [with]
openmp: [with]
include:
- os: ubuntu-24.04-arm
compiler: gcc
compiler-pkgs: "g++ gcc"
cc: "gcc"
cxx: "g++"
mpi: with
openmp: without
openmp-cmake-flags: "-DWITH_OpenMP=OFF"
env:
CC: ${{ matrix.cc }}
CXX: ${{ matrix.cxx }}
steps:
- name: get CPU information
run: lscpu
- name: checkout repository
uses: actions/checkout@v4
with:
submodules: recursive
- name: install dependencies
run: |
sudo apt -qq update
sudo apt install -y ${{ matrix.compiler-pkgs }} cmake gfortran \
libopenblas-dev \
$([ "${{ matrix.mpi }}" == "with" ] && echo "libhypre-dev") \
$([ "${{ matrix.mpi }}" == "with" ] && echo "libopenmpi-dev libmumps-dev libparmetis-dev") \
$([ "${{ matrix.compiler }}" == "gcc" ] && echo "libsuitesparse-dev") \
$([ "${{ matrix.compiler }}" == "gcc" ] && [ "${{ matrix.mpi }}" == "with" ] && echo "librocalution-dev") \
$([ "${{ matrix.mpi }}" == "with" ] && echo "trilinos-all-dev libptscotch-dev") \
$([ "${{ matrix.mpi }}" == "with" ] && echo "libnetcdff-dev")
- name: configure
# CHOLMOD and rocALUTION require a working OpenMP package. So, disable them for clang.
run: |
# work around error in the rocALUTION CMake config file distributed by Ubuntu
if [ "${{ matrix.compiler }}" == "gcc" ] && [ "${{ matrix.mpi }}" == "with" ]; then
sudo sed -i '/find_dependency(HIP)/d' /usr/lib/$(dpkg-architecture -qDEB_HOST_MULTIARCH)/cmake/rocalution/rocalution-config.cmake
fi
mkdir ${GITHUB_WORKSPACE}/build
cd ${GITHUB_WORKSPACE}/build
cmake \
-DCMAKE_BUILD_TYPE="RelWithDebInfo" \
-DCMAKE_INSTALL_PREFIX="${GITHUB_WORKSPACE}/usr" \
-DBLA_VENDOR="OpenBLAS" \
${{ matrix.openmp-cmake-flags }} \
-DWITH_LUA=ON \
$([ "${{ matrix.mpi }}" == "with" ] && echo "-DWITH_Zoltan=OFF" || echo "-DWITH_Zoltan=OFF") \
$([ "${{ matrix.mpi }}" == "with" ] && echo "-DWITH_Mumps=OFF" || echo "-DWITH_Mumps=OFF") \
$([ "${{ matrix.compiler }}" == "gcc" ] && echo "-DWITH_CHOLMOD=OFF" || echo "-DWITH_CHOLMOD=OFF") \
$([ "${{ matrix.mpi }}" == "with" ] && echo "-DWITH_Hypre=OFF -DHYPRE_INCLUDE_DIR=/usr/include/hypre" || echo "-DWITH_Hypre=OFF") \
$([ "${{ matrix.compiler }}" == "gcc" ] && [ "${{ matrix.mpi }}" == "with" ] && echo "-DWITH_ROCALUTION=OFF" || echo "-DWITH_ROCALUTION=OFF") \
$([ "${{ matrix.mpi }}" == "with" ] && echo "-DWITH_ElmerIce=OFF" || echo "-DWITH_ElmerIce=OFF") \
-DWITH_ELMERGUI=OFF \
-DWITH_VTK=OFF \
-DWITH_OCC=OFF \
-DWITH_MATC=OFF \
-DWITH_PARAVIEW=OFF \
-DCREATE_PKGCONFIG_FILE=ON \
$([ "${{ matrix.mpi }}" == "with" ] && echo "-DWITH_MPI=ON -DMPI_TEST_MAXPROC=2 -DMPIEXEC_PREFLAGS=--allow-run-as-root" || echo "-DWITH_MPI=OFF") \
$([ "${{ matrix.mpi }}" == "with" ] && echo "-DWITH_Trilinos=OFF" || echo "-DWITH_Trilinos=OFF") \
..
- name: build
run: |
cd ${GITHUB_WORKSPACE}/build
cmake --build . -j$(nproc)
- name: install
run: |
cd ${GITHUB_WORKSPACE}/build
cmake --install .
- name: check
id: run-ctest
timeout-minutes: 150
env:
CTEST_OUTPUT_ON_FAILURE: 1
run: |
cd ${GITHUB_WORKSPACE}/build
ctest . \
-LE slow \
-j$(nproc) \
--timeout 300
- name: Re-run tests
if: always() && (steps.run-ctest.outcome == 'failure')
timeout-minutes: 60
env:
CTEST_OUTPUT_ON_FAILURE: 1
run: |
cd ${GITHUB_WORKSPACE}/build
# get names of failed tests and strip potential "_np*" suffix
failed_tests=($(ctest . -N --rerun-failed | grep -E "Test\s+#.*" | awk '{print $3}' | sed -e 's/_np[0-9]*$//g'))
# remove duplicate test names
unique_failed_tests=($(echo "${failed_tests[@]}" | tr ' ' '\n' | sort -u | tr '\n' ' '))
for test in "${unique_failed_tests[@]}"; do
# check if test is from fem or ElmerIce
if [ -d fem/tests/${test} ]; then
test_root=fem/tests
else
test_root=elmerice/Tests
fi
echo "::group::Content of ${test_root}/${test}"
echo ---- Files ----
ls -Rl ${test_root}/${test}
if [ -f ${test_root}/${test}/test-stderr*.log ]; then
err_logs=($(ls ${test_root}/${test}/test-stderr*.log))
for err_log in "${err_logs[@]}"; do
echo ---- Content of ${err_log} ----
cat ${err_log}
done
fi
if [ -f ${test_root}/${test}/test-stdout*.log ]; then
out_logs=($(ls ${test_root}/${test}/test-stdout*.log))
for out_log in "${out_logs[@]}"; do
echo ---- Content of ${out_log} ----
cat ${out_log}
done
fi
echo "::endgroup::"
done
echo "::group::Re-run failing tests"
ctest --rerun-failed --output-on-failure --timeout 180 || true
echo "::endgroup::"
echo "::group::Log from these tests"
[ ! -f Testing/Temporary/LastTest.log ] || cat Testing/Temporary/LastTest.log
echo "::endgroup::"