Merge master 20250728#3365
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ctsm5.3.064: Add time dimension to *1d_wt* fields that change in transient simulations
Add time dimension to *1d_wt* fields that change in transient simulations Add namelist variable vars_1d_w_time that defaults true in transient runs and false in non-transient. User may change it to true in non-transient, but they will get an error if they change to false in transient.
ctsm5.3.065: Merge b4bdev 20250725
Merge b4b-dev to master Implement namelist options for soil moisture activation factor used in MEGAN isoprene emissions. Adds a GitHub issue template for things related to documentation. Fixes a self-test. Adds a broadcast of the namelist value for a few mapalgo items after reading it in so it is consistent across all ranks when not using the default value. Also update the mapalgo options list to be consistent with the NUOPC options, the MCT list was in place before this. Update submodules so we are using the latest in cesm development for cesm3_0_alpha07b. Harden github actions to improve security (use a hash, rather than a tag, reduce permissions to readonly when possible) Update SpinupStability scripts for h0->h0a transition (backwards compatible). Update run_clm_historical script for nuopc, extension through 2023, produces restart files for 1979 and 2000, and h0->h0a transition (backwards compatible). Remove flexCN_FUN_BNF test and testmods as redundant Fix string replacements in lreprstruct test: The previous logic caused problems if "GRAIN" appeared in two (or more) strings, where one was a substring of the other. For example, in LREPRSTRUCT_Ly1_P128x1.f10_f10_mg37.I1850Clm50BgcCrop.derecho_gnu.clm-ciso--clm-cropMonthOutput, before this replacement, one line contained 'GRAINN_TO_FOOD' and a later line contained (among other things) "'GRAINN_TO_FOOD_PERHARV', 'GRAINN_TO_FOOD_ANN'". This was problematic because the first replacement of GRAINN_TO_FOOD incorrectly led to replacements in the later strings as well.
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Description of changes
merge ctsm5.3.065 to b4b-dev
Specific notes
Contributors other than yourself, if any:
CTSM Issues Fixed (include github issue #):
Are answers expected to change (and if so in what way)?
Any User Interface Changes (namelist or namelist defaults changes)?
Does this create a need to change or add documentation? Did you do so?
Testing performed, if any: None