Transport and Covariance Matrices #2820
Workflow file for this run
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| name: 🔍 CodeQL | |
| on: | |
| push: | |
| branches: [ "development" ] | |
| pull_request: | |
| branches: [ "development" ] | |
| schedule: | |
| - cron: "27 3 * * 0" | |
| concurrency: | |
| group: ${{ github.ref }}-${{ github.head_ref }}-codeql | |
| cancel-in-progress: true | |
| jobs: | |
| analyze: | |
| name: Analyze | |
| runs-on: ubuntu-latest | |
| permissions: | |
| actions: read | |
| contents: read | |
| security-events: write | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| language: [ python, cpp ] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| name: Install Python | |
| with: | |
| python-version: '3.x' | |
| - name: Install Packages | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install --yes cmake openmpi-bin libfftw3-dev libfftw3-mpi-dev libopenmpi-dev libhdf5-openmpi-dev | |
| python -m pip install --upgrade pip | |
| python -m pip install --upgrade pipx | |
| python -m pip install --upgrade wheel | |
| python -m pip install --upgrade numpy | |
| python -m pip install --upgrade mpi4py | |
| python -m pip install --upgrade pytest | |
| python -m pip install --upgrade cmake | |
| python -m pipx install cmake | |
| - name: Configure (C++) | |
| if: ${{ matrix.language == 'cpp' }} | |
| run: | | |
| cmake -S . -B build -DImpactX_FFT=ON -DImpactX_PYTHON=OFF | |
| - name: Initialize CodeQL | |
| uses: github/codeql-action/init@v3 | |
| with: | |
| config-file: ./.github/codeql/impactx-codeql.yml | |
| languages: ${{ matrix.language }} | |
| queries: +security-and-quality | |
| - name: Build (py) | |
| uses: github/codeql-action/autobuild@v3 | |
| if: ${{ matrix.language == 'python' }} | |
| env: | |
| IMPACTX_FFT: ON | |
| - name: Build (C++) | |
| if: ${{ matrix.language == 'cpp' }} | |
| run: | | |
| cmake --build build -j 4 | |
| - name: Perform CodeQL Analysis | |
| uses: github/codeql-action/analyze@v3 | |
| with: | |
| category: "/language:${{ matrix.language }}" | |
| upload: False | |
| output: sarif-results | |
| - name: filter-sarif | |
| uses: advanced-security/filter-sarif@v1 | |
| with: | |
| patterns: | | |
| -build/app/AMReX_buildInfo.cpp | |
| -build/_deps/*/* | |
| -build/_deps/*/*/* | |
| -build/_deps/*/*/*/* | |
| -build/_deps/*/*/*/*/* | |
| -build/_deps/*/*/*/*/*/* | |
| -build/_deps/*/*/*/*/*/*/* | |
| -build/_deps/*/*/*/*/*/*/*/* | |
| input: sarif-results/${{ matrix.language }}.sarif | |
| output: sarif-results/${{ matrix.language }}.sarif | |
| - name: Upload SARIF | |
| uses: github/codeql-action/upload-sarif@v3 | |
| with: | |
| sarif_file: sarif-results/${{ matrix.language }}.sarif |