Build time fix for index data types when loading sequences from OMA DB. Bump to v2.0.5

Author: alex-wave

omamer/__init__.py

@@ -23,7 +23,7 @@
 from datetime import date
 
 __packagename__ = "omamer"
-__version__ = "2.0.4"
+__version__ = "2.0.5"
 __copyright__ = "(C) 2019-{:d} Victor Rossier <[email protected]> and Alex Warwick Vesztrocy <[email protected]>".format(
     date.today().year
 )

omamer/database.py

@@ -1549,8 +1549,8 @@ def select_and_filter_OMA_proteins(
 
                     # sequence
                     oma_seq_off = rr["SeqBufferOffset"]
-                    seq_len = rr["SeqBufferLength"] - 1
-                    seq = oma_seq_buffer[oma_seq_off : oma_seq_off + seq_len + 1]
+                    seq_len = rr["SeqBufferLength"] - np.uint64(1)
+                    seq = oma_seq_buffer[oma_seq_off : oma_seq_off + seq_len + np.uint64(1)]
                     seq_buffs.append(seq)
 
                     # store protein row