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506 Open 379 Closed
506 Open 379 Closed
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Issues list

k2 download-library --assembly-levels ignored for pre-defined values of --library
#941 opened Mar 26, 2025 by YourePrettyGood
Creating a genome database from GTDB sequences
#940 opened Mar 26, 2025 by gillyv8
k2mask stuck when launched through the kraken2-build
#939 opened Mar 26, 2025 by Alteroldis
1
Downloading nucleotide gb accession to taxon map...
#938 opened Mar 25, 2025 by smoothyly
2
REQUEST: Compression for output files
#937 opened Mar 24, 2025 by Alteroldis
Proposed changes to allow report merging
#936 opened Mar 21, 2025 by colinvwood
install_kraken2.sh failes due to missing VERSION file
#935 opened Mar 20, 2025 by andreasd
3
Wrong tagname for 2.1.4
#933 opened Mar 19, 2025 by Flamefire
Taxonomy directory empty
#932 opened Mar 18, 2025 by RafaellaFerraz
Taxonomy classification table
#931 opened Mar 18, 2025 by cmmertz
Current version tag not formated correctly
#930 opened Mar 18, 2025 by ewearpel
plasmid files in standard Kraken2 database
#929 opened Mar 12, 2025 by nooroka
2
Got stuck when building kraken2 database
#928 opened Mar 12, 2025 by Kuakua-c
29
Kraken2 Classification for 11 bp Sequences
#927 opened Mar 11, 2025 by Morteza1814
conda/pixi installing the wrong verion of kraken2
#926 opened Mar 10, 2025 by mauricebarrett
2
k2 download-library plasmid error
#925 opened Mar 9, 2025 by 543090lee
4
PR2 library
#924 opened Mar 4, 2025 by Zhangxp0315
1
Seg-fault when calculating KrakenReportDFS in parallel
#923 opened Mar 3, 2025 by jchorl
4
Building database fails
#922 opened Mar 1, 2025 by wyll-wyll-wyll
2
Outdated VERSION in install_kraken2.sh for v2.1.4
#920 opened Feb 24, 2025 by Simon-Brandt
1
kraken2-inspect differs for kraken2 version 2.1.4 and 2.1.3
#919 opened Feb 24, 2025 by palatinate
2
Kraken-report without --report-zero-counts has sometimes missing entries
#918 opened Feb 24, 2025 by palatinate
4
Latest update (v2.1.4) produces invalid fastq files with --classified-out
#917 opened Feb 22, 2025 by csigabigusz
4
reference genome tree
#916 opened Feb 19, 2025 by jianshu93
kraken2:the error during building the taxonomy
#915 opened Feb 19, 2025 by kobez6
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