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  • Cambridge Uni, Institute for Protein Design (Baker lab), ETH Zurich
  • Cambridge UK

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  1. chaitjo/geometric-gnn-dojo chaitjo/geometric-gnn-dojo Public

    Geometric GNN Dojo provides unified implementations and experiments to explore the design space of Geometric Graph Neural Networks.

    Jupyter Notebook 470 42

  2. pymol-remote pymol-remote Public

    Send data to and from pymol from a remote server (e.g. a cluster running deep learning workflows)

    Python 9

  3. ai4er-cdt/geograph ai4er-cdt/geograph Public

    GeoGraph provides a tool for analysing habitat fragmentation and related problems in landscape ecology. GeoGraph builds a geospatially referenced graph from land cover or field survey data and enab…

    Jupyter Notebook 39 10

  4. hex_howl hex_howl Public

    Python 6 2

  5. a-r-j/ProteinWorkshop a-r-j/ProteinWorkshop Public

    Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models and training/task utilities. (ICLR 2024)

    Python 200 16

  6. Hollfelder-Lab/lrDMS-IRED Hollfelder-Lab/lrDMS-IRED Public

    Code, data and notebooks for engineering enzymes with ultra-high throughput microfluidics. Please read our accompanying paper for details.

    Jupyter Notebook 6