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Consider lightweight deleted rows when selecting parts to merge #58223

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merged 5 commits into from
Mar 15, 2024

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@jewelzqiu jewelzqiu commented Dec 26, 2023

resolves #56728

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  • Improvement

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Consider lightweight deleted rows when selecting parts to merge

@tavplubix tavplubix added the can be tested Allows running workflows for external contributors label Jan 3, 2024
@robot-clickhouse-ci-1 robot-clickhouse-ci-1 added the pr-improvement Pull request with some product improvements label Jan 3, 2024
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robot-clickhouse-ci-1 commented Jan 3, 2024

This is an automated comment for commit be4554b with description of existing statuses. It's updated for the latest CI running

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jewelzqiu commented Jan 5, 2024

@yakov-olkhovskiy failed integration test looks unrelated to the PR

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I think we shouldn't calculate existing_rows_count on mutate, but rather on delete itself and then update on merge along with raws_count

src/Storages/MergeTree/MutateTask.cpp Outdated Show resolved Hide resolved
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I think we shouldn't calculate existing_rows_count on mutate, but rather on delete itself and then update on merge along with raws_count

@yakov-olkhovskiy I don't understand the delete and merge, but I guess you are suggesting the following approach?

Calculating existing count while writing _row_exists column for the new part

also @davenger do you have any comment on this?

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yes, I meant calculate on DELETE FROM and update as needed on merge

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yes, I meant calculate on DELETE FROM and update as needed on merge

@yakov-olkhovskiy lightweight deleted rows will be physically deleted during merge, so we only need to calculate existing count during mutation on _row_exists column. I will try to implement this.

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Please consider extending count.txt instead of adding another file (but it's just a suggestion)

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Please consider extending count.txt instead of adding another file (but it's just a suggestion)

@tavplubix It is ok to do that for new parts, but I think we should not change the count.txt content of existing parts?
If existing parts cannot be handled, then the original issue still remains...

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we should not change the count.txt content of existing parts?

Yes, but we also cannot add another file to an existing part without running a mutation. And it both cases we should take compatibility into account

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yakov-olkhovskiy commented Jan 10, 2024

@jewelzqiu DELETE FROM is a special case of ALTER ... UPDATE mutation:
https://github.com/ClickHouse/ClickHouse/blob/master/src/Interpreters/InterpreterDeleteQuery.cpp#L88
I think most straightforward way is to add existing_rows_count during this mutation, but whenever this counter is used treat it as optional - i.e. if it isn't present - continue as it was before, if it is present - use it - this way it will be backward compatible. As alternative if this counter is not present - calculate it on the fly (as it was done in previous attempt) - but I'm not sure it's a good solution though - it will add (temporary, for old parts) overhead we want to avoid...

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Let me summarize current options (add drawbacks):

For existing parts:

  1. calculate on part loading (leads to longer starting time)
  2. lazy calculation when accessed (leads to slower background processing)

For new parts:

  1. extends count.txt (differs from public knowledge about count.txt)
  2. add existing_count.txt (adds new file to data part)

Personally I prefer calculating on loading for existing parts, because:

  1. starting time is less important
  2. no need to lock the calculation

As for the new parts I can live with either option, maybe extending count.txt is slightly better logically

@yakov-olkhovskiy @tavplubix what are your thoughts?

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for existing parts there is another option - left as it is
@tavplubix ?

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for existing parts there is another option - left as it is

Yes, we can just leave old parts as they are. Eventually, they will be merged and the existing rows count will be added

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tavplubix commented Jan 11, 2024

we should not change the count.txt content of existing parts?

Yes, but we also cannot add another file to an existing part without running a mutation. And it both cases we should take compatibility into account

Just in case, let me clarify what is the most complex part about compatibility:

Imagine you have a cluster of multiple replicas, and you do rolling upgrade, upgrading them one by one (the usual scenario). You have upgraded one replica. It gets new INSERT and DELETE queries and execute meres and mutations. It writes a part with a new existing_count.txt file or count.txt in the new format. Parts are being replicated to other replicas (with old version), but other replicas do not expect that. Also, it's impossible to downgrade if something went wrong during upgrading.

Possible (the simplest) solution: add a setting to enable/disable the new format

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@tavplubix let's say we have new part with existing_count.txt replicated to old version - wouldn't it just be ignored? or we count it as an error if unknown file is present?

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let's say we have new part with existing_count.txt replicated to old version - wouldn't it just be ignored?

I'm not sure, need to check

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jewelzqiu commented Jan 12, 2024

for existing parts there is another option - left as it is

If so, it doesn't help resolving the original issue: existing large parts with lightweight deleted rows cannot be merged

As for ability to downgrade to older version, I think both adding existing_rows_count.txt and changing count.txt will cause error

To minimize the impact on existing architecture, we could implement this way:

  1. for existing parts, calculate on parts loading
  2. during _row_exists related mutation, calculate while writing new parts
  3. for other mutations, copy existing_rows_count from source part
  4. for merged or inserted part, existing_rows_count equals rows_count

No files will be add or changed

@yakov-olkhovskiy @tavplubix

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lqhl commented Jan 17, 2024

for existing parts there is another option - left as it is

If so, it doesn't help resolving the original issue: existing large parts with lightweight deleted rows cannot be merged

As for ability to downgrade to older version, I think both adding existing_rows_count.txt and changing count.txt will cause error

To minimize the impact on existing architecture, we could implement this way:

1. for existing parts, calculate on parts loading

2. during `_row_exists` related mutation, calculate while writing new parts

3. for other mutations, copy `existing_rows_count` from source part

4. for merged or inserted part, `existing_rows_count` equals `rows_count`

No files will be add or changed

@yakov-olkhovskiy @tavplubix

hi @yakov-olkhovskiy @tavplubix , can we proceed with this design? it won't change or add any files in data parts.

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If so, it doesn't help resolving the original issue: existing large parts with lightweight deleted rows cannot be merged

the idea was that we gradually get rid of old parts without existing_rows_count.txt and all new parts with lightweight deletes would have it

As for ability to downgrade to older version

it's not only ability to downgrade though - the question is how old version would behave having new parts replicated from new version. Probably this question is the same with ability to downgrade - i.e. how old version behaves having new parts.

Overall I think we can proceed with your plan (maybe (1) is not necessary), but we definitely should investigate all these concerns.

@jewelzqiu jewelzqiu changed the title Add existing_count.txt & Consider deleted rows when selecting parts to merge Consider lightweight deleted rows when selecting parts to merge Jan 18, 2024
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  1. for existing parts, calculate on parts loading
  2. during _row_exists related mutation, calculate while writing new parts
  3. for other mutations, copy existing_rows_count from source part
  4. for merged or inserted part, existing_rows_count equals rows_count

@yakov-olkhovskiy I have implemented such method with a setting for step 1

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I'm not sure how effective this solution will be without existing_rows_count in metadata...

src/Storages/MergeTree/IMergeTreeDataPart.h Outdated Show resolved Hide resolved
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@jewelzqiu I'm leaving for vacation for a week - let's continue when I'm back. Overall I think the usefulness if this without metadata will be quite limited...

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Overall I think the usefulness if this without metadata will be quite limited...

@yakov-olkhovskiy well, it is useful if load_existing_rows_count_for_old_parts enabled though.
To maintain backward compatibility, it is safer to disable it by default and enable it on demand

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@jewelzqiu I'm not sure on perspectives of enabling this by default though - it will slow down startup. I will discuss it tomorrow with the team... the PR itself looks good - I'll go through it one more time if we will decide to merge it...

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@tavplubix we abandoned the idea to have it in metadata - now it only calculates on a fly - do you still have any suspicions this feature could not work with SharedMergeTree?

@tavplubix tavplubix marked this pull request as draft February 28, 2024 23:10
@jewelzqiu jewelzqiu marked this pull request as ready for review February 29, 2024 01:56
@jewelzqiu jewelzqiu force-pushed the existing-count branch 2 times, most recently from 94c5846 to f1b37b6 Compare March 1, 2024 05:59
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@yakov-olkhovskiy Any update? I have rebased on to latest master several days ago

@yakov-olkhovskiy yakov-olkhovskiy merged commit a31f551 into ClickHouse:master Mar 15, 2024
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@jewelzqiu I merged it but maybe you would like to make an additional PR documenting this feature so ppl can use it...

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Merge issue about large data part with lightweight delete
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