Update deps: use ClimaAtmos 0.15.2

[valeriabarra]

Purpose

This PR updates ClimaCoupler to use the latest dependecies. Including:

• ClimaLSM v0.2.6
• ClimaComms v0.5.3
• ClimaCore v0.10.43
• ClimaAtmos v0.15.2

Closes #344
Closes #341

Content

• Updated top-level and experiments/AMIP/modular, test/, perf/ Project.toml files
• Updated checked-in Manifest.toml files
• Updated ClimaAtmos CLI options
• Updated both regular and longrun pipelines with current CLI options
• Removed compat entries that were duplicated between the top-level environment and the lower-level ones

Review checklist

I have:

• followed the codebase contribution guide: https://clima.github.io/ClimateMachine.jl/latest/Contributing/
• followed the style guide: https://clima.github.io/ClimateMachine.jl/latest/DevDocs/CodeStyle/
• followed the documentation policy: https://github.com/CliMA/policies/wiki/Documentation-Policy
• checked that this PR does not duplicate an open PR.

In the Content, I have included

• relevant unit tests, and integration tests,
• appropriate docstrings on all functions, structs, and modules, and included relevant documentation.

---

• I have read and checked the items on the review checklist.

[valeriabarra]

CI passes and this PR is ready for review. Thanks

[juliasloan25]

I just had a few comments about duplicated compat entries in the top level as well as subdirectories. It might be easier to maintain the dependencies in the future if we just have these specified in the top level, but up to you. I opened an issue about this a couple weeks ago in case it's something we want to change #341

[valeriabarra]

Okay. I have applied all suggestions and rebased. Please let me know if approved, we can merge it. Thanks guys!

[juliasloan25]

I just had a couple comments about the ClimaComms compats

[juliasloan25]

Looks good! Thank you, Valeria :)

[valeriabarra]

bors r+

[bors]

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