HPA-competition

Analysis of the Human Protein Atlas Image Classification Competition

1. Source code for plots
2. Script to download HPAv18
3. Source code of team solutions

Source code for plots

• See paper_counts.ipynb for source for plots that analyse the competition data counts, eg number of images, number of labels etc.
• See paper_scores.ipynb for source for plots that analyse the team scores.

Script to download HPAv18

• Run download_hpa_dataset.py to download the HPAv18 image dataset from https://www.proteinatlas.org.

  pip3 install -r requirements.txt
  python3 download_hpa_dataset.py
  

Source code of team solutions

• See this repository for the source code of the teams that are co-authors of the paper.