Skip to content

badger machine files to use LANL IC netcdf libraries #351

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
apcraig merged 1 commit into from
Aug 14, 2019
Merged

badger machine files to use LANL IC netcdf libraries #351

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
12 changes: 4 additions & 8 deletions configuration/scripts/machines/Macros.badger_intel
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -31,23 +31,19 @@ else
endif
LD:= $(FC)

# set in Macros file
NETCDF_PATH := /usr/projects/climate/SHARED_CLIMATE/software/conejo/netcdf/3.6.3/intel-13.0.1
PNETCDF_PATH := /usr/projects/climate/SHARED_CLIMATE/software/conejo/parallel-netcdf/1.3.1/intel-13.0.1/openmpi-1.6.3
#LAPACK_LIBDIR := /glade/apps/opt/lapack/3.4.2/intel/12.1.5/lib
NETCDF_PATH := /usr/projects/hpcsoft/toss3/common/netcdf/4.4.0_intel-18.0.5
PNETCDF_PATH := /usr/projects/hpcsoft/toss3/badger/netcdf/4.4.0_intel-18.0.5_openmpi-2.1.2

PIO_CONFIG_OPTS:= --enable-filesystem-hints=gpfs

ifeq ($(ICE_IOTYPE), netcdf)
INCLDIR := $(INCLDIR) -I$(NETCDF_PATH)/include
# INCLDIR := $(INCLDIR) -I/usr/projects/climate/SHARED_CLIMATE/software/conejo/netcdf/3.6.3/intel-13.0.1/include
INCLDIR := $(INCLDIR) -I$(NETCDF_PATH)/include -I$(PNETCDF_PATH)/include

LIB_NETCDF := $(NETCDF_PATH)/lib
LIB_PNETCDF := $(PNETCDF_PATH)/lib
LIB_MPI := $(IMPILIBDIR)

#SLIBS := -L$(LIB_NETCDF) -lnetcdf -L$(LIB_PNETCDF) -lpnetcdf -L$(LAPACK_LIBDIR) -llapack -lblas
SLIBS := -L$(LIB_NETCDF) -lnetcdf -L$(LIB_PNETCDF) -lpnetcdf
SLIBS := -L$(LIB_NETCDF) -lnetcdf -L$(LIB_PNETCDF) -lnetcdff
else
SLIBS :=
endif
Expand Down
12 changes: 8 additions & 4 deletions configuration/scripts/machines/env.badger_intel
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -12,10 +12,14 @@ if ("$inp" != "-nomodules") then
#module purge
#module load intel
#module load openmpi

setenv NETCDF_PATH /usr/projects/climate/SHARED_CLIMATE/software/conejo/netcdf/3.6.3/intel-13.0.1
setenv PNETCDF_PATH /usr/projects/climate/SHARED_CLIMATE/software/conejo/parallel-netcdf/1.3.1/intel-13.0.1/openmpi-1.6.3
#setenv LAPACK_LIBDIR /glade/apps/opt/lapack/3.4.2/intel/12.1.5/lib
module unload hdf5-serial
module unload hdf5-parallel
module unload netcdf-serial
module unload netcdf-h5parallel
module load hdf5-serial
module load netcdf-serial/4.4.0
module load hdf5-parallel
module load netcdf-h5parallel/4.4.0

#setenv OMP_STACKSIZE 256M
#setenv MP_LABELIO yes
Expand Down