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biox-nku.github.io Public
Homepage of BioX Lab at Nankai University.
CSS MIT License UpdatedMar 19, 2025 -
MethAgingDB Public
A comprehensive DNA methylation database for aging biology
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Fountain Public
Rigorous integration of single-cell ATAC-seq data using regularized barycentric mapping
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cpDistiller Public
Triple-effect correction for Cell Painting data with contrastive and domain-adversarial learning
Python MIT License UpdatedFeb 10, 2025 -
scCASdb Public
Facilitating single-cell chromatin accessibility research with a user-friendly database
MIT License UpdatedDec 21, 2024 -
MINGLE Public
A mutual information-based interpretable framework for automatic cell type annotation in single-cell chromatin accessibility data
Python MIT License UpdatedDec 14, 2024 -
ContrastGCN Public
An interpretable ensemble framework for automatic cell type annotation in single-cell chromatin accessibility data
Python MIT License UpdatedDec 3, 2024 -
scBackdoor Public
Backdoor attacks in single-cell pretrained models
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MultiKano Public
MultiKano: an automatic cell type annotation tool for single-cell multi-omics data based on Kolmogorov-Arnold network and data augmentation
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CSFeatures Public
Identification of cell type-specific differential features in single-cell and spatial omics data
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scButterfly Public
A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders
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scCrab Public
A reference-guided cancer cell identification method based on Bayesian neural networks
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scButterfly_source Public
Source codes for the reproduction of scButterfly
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EpiCarousel Public
Memory- and time-efficient identification of metacells for atlas-level single-cell chromatin accessibility data
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scCASE Public
Accurate and interpretable enhancement for single-cell chromatin accessibility sequencing data
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RAINBOW Public
Accurate cell type annotation for single-cell chromatin accessibility data via contrastive learning and reference guidance
Python MIT License UpdatedMay 7, 2023 -
CASCADE Public
Accurate Annotation for Differentiating and Imbalanced Cell Types in Single-cell Chromatin Accessibility Data
Python MIT License UpdatedFeb 22, 2023 -
SINFONIA Public
scalable identification of spatially variable genes for deciphering spatial domains
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ASTER Public
ASTER: accurately estimating the number of cell types in single-cell chromatin accessibility data