CI unit test workflow fails

[prjemian]

Fails during Install & cache databroker catalogs step:

gcc -pthread -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DHAVE_LZ4=1 -DHAVE_ZLIB=1 -DHAVE_ZSTD=1 -Ic-blosc/blosc -Ic-blosc/internal-complibs/zstd-1.4.8 -Ic-blosc/internal-complibs/zlib-1.2.8 -Ic-blosc/internal-complibs/lz4-1.9.3 -Ic-blosc/internal-complibs/zstd-1.4.8/decompress -Ic-blosc/internal-complibs/zstd-1.4.8/deprecated -Ic-blosc/internal-complibs/zstd-1.4.8/legacy -Ic-blosc/internal-complibs/zstd-1.4.8/dll -Ic-blosc/internal-complibs/zstd-1.4.8/dictBuilder -Ic-blosc/internal-complibs/zstd-1.4.8/compress -Ic-blosc/internal-complibs/zstd-1.4.8/common -Ic-blosc/internal-complibs/zstd-1.4.8/dll/example -I/opt/hostedtoolcache/Python/3.11.0/x64/include/python3.11 -c numcodecs/blosc.c -o build/temp.linux-x86_64-cpython-311/numcodecs/blosc.o -msse2 -mavx2 -DSHUFFLE_SSE2_ENABLED -DSHUFFLE_AVX2_ENABLED
numcodecs/blosc.c:308:12: fatal error: longintrepr.h: No such file or directory
  308 |   #include "longintrepr.h"
      |            ^~~~~~~~~~~~~~~
compilation terminated.
[numcodecs] command '/usr/bin/gcc' failed with exit code 1

[prjemian]

Seems related to:

• Package fails to install on python 3.11.0a5: fatal error: longintrepr.h: No such file or directory zeromq/pyzmq#1655
• Fails to build on Python 3.11 - longintrepr.h: No such file or directory ParallelSSH/ssh2-python#174
• https://issueantenna.com/repo/aio-libs/aiohttp/issues/6600
• others

[prjemian]

As the logs show, this uses a released version of Python 3.11.0

2022-11-10T17:19:35.4132979Z Successfully setup CPython (3.11.0)
2022-11-10T17:19:35.4283133Z ##[group]Run python -m pip install --upgrade pip

[prjemian]

Can workflow change the Python version for this step?

apstools/.github/workflows/unit_tests.yml

Line 45 in 51d9f04

- uses: actions/setup-python@v2

Latest release is v4.3.0, try upgrade to actions/setup-python@v4 first.

[prjemian]

If still a problem, then:

- uses: actions/setup-python@v4
  with:
    python-version: '3.10' 

[prjemian]

Any fix for the problem (when using Python 3.11) must come from upstream.

[prjemian]

With the workflow action change (19bbdc7), no error with that workflow step.

[prjemian]

Add Py3.11 to CI testing and supported versions.

Note no CI testing with Python 3.11 (3.11.0 is now released).

apstools/.github/workflows/unit_tests.yml

Line 81 in 51d9f04

python-version: ['3.8', '3.9', '3.10']

apstools/setup.cfg

Lines 62 to 64 in 51d9f04

	Programming Language :: Python :: 3.8
	Programming Language :: Python :: 3.9
	Programming Language :: Python :: 3.10