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Set of admixture tools written in Python with a JavaScript frontend.

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Python HTML5 JavaScript Flask

A set of admixture tools written in Python with a JavaScript frontend.

Try it out: http://admixturepy.pythonanywhere.com/

Features

  • Monte-Carlo Simulation in Python (sped up using numba) to estimate Global25 ancestry
  • Distance calculator
  • 2D/3D PCA analysis
  • Custom samples
  • Loading and saving models through JSON
  • Complete API access to the G25 database
  • Implemented in Flask
  • Lightweight, and easily deployable
  • Sleek and clean UI implemented using Bootstrap 4

Yet to be implemented

  • CUDA implementation of nMonte to speed up calculations
Index Distance Calculator UI
2D PCA 3D PCA

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Set of admixture tools written in Python with a JavaScript frontend.

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