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@ARU-life-sciences

ARU life sciences

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  1. coding_club coding_club Public

    Coding club ideas

    R 4

  2. bioinformatics bioinformatics Public

    General help and topics on bioinformatics

    HTML 1

  3. paf paf Public

    A PAF file parser.

    Rust

  4. psd psd Public

    PAF sequence divergence calculations.

    Rust

Repositories

Showing 10 of 17 repositories
  • hmm_to_gff Public

    Convert HMMER hmmscan output to a GFF for annotation.

    ARU-life-sciences/hmm_to_gff’s past year of commit activity
    Rust 0 0 0 0 Updated Feb 19, 2025
  • gffplot Public

    Plot a GFF3 file. Specific for plant mitos from my pipeline so far. Might make generic later.

    ARU-life-sciences/gffplot’s past year of commit activity
    HTML 0 0 0 0 Updated Feb 17, 2025
  • filter_tblout Public

    Filter protein HMMER tblout files.

    ARU-life-sciences/filter_tblout’s past year of commit activity
    Rust 0 0 0 0 Updated Feb 13, 2025
  • hmm_tblout Public

    Parse `--tblout` files from `nhmmer`.

    ARU-life-sciences/hmm_tblout’s past year of commit activity
    Rust 0 MIT 0 0 0 Updated Feb 12, 2025
  • rep Public
    ARU-life-sciences/rep’s past year of commit activity
    Rust 0 0 0 0 Updated Jan 21, 2025
  • mmft Public

    My Minimal Fasta Toolkit

    ARU-life-sciences/mmft’s past year of commit activity
    Rust 6 MIT 0 0 0 Updated Dec 19, 2024
  • coding_club Public

    Coding club ideas

    ARU-life-sciences/coding_club’s past year of commit activity
    R 4 0 0 0 Updated Nov 20, 2024
  • plopaf Public

    A PAF plotter based heavily on https://github.com/ekg/pafplot.

    ARU-life-sciences/plopaf’s past year of commit activity
    Rust 0 0 1 0 Updated Nov 13, 2024
  • paf Public

    A PAF file parser.

    ARU-life-sciences/paf’s past year of commit activity
    Rust 0 MIT 0 1 0 Updated Oct 29, 2024
  • tr_detection Public

    TR detection across plants.

    ARU-life-sciences/tr_detection’s past year of commit activity
    Shell 0 0 0 0 Updated Oct 15, 2024
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