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Issues list

Suggestion of new features enhancement New Feature
#99 opened May 2, 2020 by loganylchen updated May 2, 2020
1
Handling multiple classes (and FDR)
#154 opened Jul 22, 2022 by Tomnl updated Jul 25, 2022
1
Specifying GO term levels OR term size with EnrichR enhancement New Feature
#185 opened Dec 23, 2022 by sruthi-hub updated Feb 4, 2023
two gene sets GSEA, DGSEA module
#197 opened Apr 7, 2023 by abearab updated Apr 18, 2023
2
Getting precise FDR values and plotting if values are 0 FAQ
#209 opened Jun 4, 2023 by ThomasThaewel updated Aug 29, 2023
1
RUST compiler? FAQ fixed question
#163 opened Aug 16, 2022 by michaelmather15 updated Aug 29, 2023
7
Can we get correct p-values and FDRs in ssgsea now?
#223 opened Sep 21, 2023 by Peevin updated Oct 2, 2023
1
Interpret GSEA plot
#228 opened Oct 16, 2023 by Cher-HAN updated Oct 16, 2023
How to get lead genes from ssGSEA object
#229 opened Oct 24, 2023 by Num0Programmer updated Oct 24, 2023
1
Handling genes with zero expression when using gp.gsea
#236 opened Nov 26, 2023 by looppy95 updated Nov 27, 2023
1
Error getting the Enrichr libraries
#235 opened Nov 24, 2023 by talponer updated Dec 19, 2023
7
Error sending data
#245 opened Feb 6, 2024 by mousepixels updated Feb 8, 2024
2
Prerank fails with list of gene sets
#252 opened Mar 5, 2024 by CDSchuster updated Mar 14, 2024
1
Using a count matrix with NA values for GSEApy
#256 opened Mar 22, 2024 by LeilyR updated Mar 22, 2024
1
The difference between input gene symbol name and geneID
#269 opened Jun 8, 2024 by lxy04 updated Jun 10, 2024
1
No module named 'gseapy.gse' FAQ
#214 opened Jul 12, 2023 by ShriHarshaAdapalaThirumala updated Jul 18, 2024
8
gene sets score and gsva
#276 opened Sep 6, 2024 by wangjiawen2013 updated Sep 6, 2024
Could not return matplotlib.Axes in python script
#259 opened Apr 8, 2024 by AfterDream updated Oct 1, 2024
3
The latest version of GSEapy is not compatible with the latest versions of PyDESeq2 and SciPy.
#288 opened Nov 17, 2024 by winterize-du updated Nov 26, 2024
2
Hoping for the Addition of Some New Features!
#289 opened Nov 20, 2024 by GhostInTheShellwjc updated Nov 27, 2024
2
'DataFrame' object has no attribute 'append'
#258 opened Apr 2, 2024 by rubickkkkk updated Dec 4, 2024
3
GSVA analysis
#294 opened Dec 19, 2024 by free-sky9527 updated Dec 19, 2024
feature request: LLM generated gene sets
#296 opened Jan 3, 2025 by zia1138 updated Jan 16, 2025
1
JSONDecodeError when using a small background list
#300 opened Feb 6, 2025 by wongkarenhy-hex updated Feb 10, 2025
13
PanicException: called Option::unwrap() on a None value
#193 opened Mar 8, 2023 by nroak updated Feb 17, 2025
13
ProTip! no:milestone will show everything without a milestone.