varia

Author: zoometh

teach/stats/r4a/2025/index-part1.qmd

@@ -132,14 +132,15 @@ A <img src='https://raw.githubusercontent.com/zoometh/thomashuet/master/img/app-
 
 ::: {.column width="30%"}
 
-<img src='https://raw.githubusercontent.com/zoometh/thomashuet/master/img/inst-inrap-archeozoologie-ex3.jpg' style='height: 350px;vertical-align: middle;'>
+<img src='https://raw.githubusercontent.com/zoometh/thomashuet/master/img/inst-inrap-archeozoologie-ex3.png' style='height: 350px;vertical-align: middle;'>
 
 :::
 
-<small>L'archéozoologie &copy; Inrap</small>
 
 :::
 
+<small>L'archéozoologie &copy; Inrap</small>
+
 
 
 ### Academy
@@ -420,7 +421,7 @@ etc.
 
 ::::
 
-
+# Narrative parts {data-background-color=#add8e6}
 
 ## Markdown syntax {#text}
 
@@ -1018,7 +1019,7 @@ Footnotes numbering are automatically updated/incremented
 
 ### Variables
 
-Variables calculated inside the <span class="r-code">code chunks</span> ... 
+Variables calculated inside the <span class="r-code">code chunks</span>
 
 <div class="div-code"> 
 <small>code chunk</small>
@@ -1034,7 +1035,7 @@ data("Handaxes")
 number.of.axes <- nrow(Handaxes)
 ```
 
-... can be called in the <span class="r-text">narrative parts</span>
+can be called in the <span class="r-text">narrative parts</span>
 
 <div class="div-text"> 
 <small>narrative part</small>

teach/stats/r4a/2025/index-part2.qmd

@@ -33,7 +33,7 @@ pagetitle: "Report with R Markdown - part 2"
 footer: "Report with R Markdown - R4Rchaeologists <img src='https://raw.githubusercontent.com/zoometh/thomashuet/master/teach/www/logo.png' style='height: 35px;vertical-align: middle;'> Università di Pisa, Jan 2025 - <em>presented by </em> Thomas Huet"
 ---
 
-# Code chunks
+# Code chunks {data-background-color=#EBEBEB}
 
 ## Code chunks {#chunks}
 
@@ -282,7 +282,7 @@ knitr::include_graphics(fibula)
 
 \
 
-# YAML
+# YAML {data-background-color=#FFCCCB}
 
 
 ## YAML {#yaml}
@@ -300,6 +300,7 @@ date: '2023-02-05'
 ```
 </div>
 
+\
 
 ```{=html}
 <script src="https://gist.github.com/zoometh/d1b4945d1c16f853a7888ede03c4807d.js"></script>
@@ -309,37 +310,50 @@ date: '2023-02-05'
 
 ## Dates
 
+:::: {.columns}
+
+::: {.column width="50%"}
+
 <div class="div-yaml"> 
 <small>header YAML</small>
 ```{.yml code-line-numbers="4"}
 ---
 title: "temp"
 output: pdf_document
-date: "'r format(Sys.time(), '%D')'"
+date: "'r format(Sys.time(),'%D')'"
 ---
 ```
 </div>
 
-`r format(Sys.time(), '%D')`
+`r format(Sys.time(),'%D')`
+
+:::
 
+::: {.column width="50%"}
 
 <div class="div-yaml"> 
 <small>header YAML</small>
 ```{.yml code-line-numbers="4"}
 ---
 title: "temp"
 output: pdf_document
-date: "'r format(Sys.time(), '%d %B %Y')'"
+date: "'r format(Sys.time(),'%d %B %Y')'"
 ---
 ```
 </div>
 
-`r format(Sys.time(), '%d %B %Y')`
+`r format(Sys.time(),'%d %B %Y')`
+
+:::
+
+::::
+
+
 
 ::: {.callout-warning}
 Here the <notes>`</notes> quote has been changed to a <notes>'</notes> quote for display purpose
 :::
-\
+
 
 ## Output
 
@@ -389,7 +403,8 @@ output:
 
 ## References
 
-Locate the bibliographic file (e.g.  [`references.bib`](https://github.com/zoometh/thomashuet/blob/main/teach/stats/r4a/2025/references.bib)).
+Locate the bibliographic file (e.g.  [`references.bib`](https://github.com/zoometh/thomashuet/blob/main/teach/stats/r4a/2025/references.bib)), here in the same folder as the `.Rmd` file.
+
 
 <div class="div-yaml"> 
 <small>header YAML</small>
@@ -403,18 +418,10 @@ bibliography: references.bib
 ```
 </div>
 
-Here in the same folder as the `.Rmd` file.
-
-
-```{=html}
-<iframe width="1000" height="400" src="https://bookdown.org/yihui/rmarkdown/html-document.html#html-document" title="YAML for R Markdown"></iframe>
-```
-
-see [Xie <em>et al.</em>](https://bookdown.org/yihui/rmarkdown/html-document.html#html-document) [-@Xie18]
 
 \
 
-# More HTML
+# More HTML {data-background-color=#FFFF00}
 
 
 ## Styling
@@ -489,7 +496,7 @@ Use a <img src='https://raw.githubusercontent.com/zoometh/thomashuet/master/img/
 ```
 <small><https://github.com/zoometh/thomashuet/blob/main/teach/stats/r4a/styles.css></small>
 
-This file is called inside the <span class="r-yaml">YAML header</span> of the document:
+This file is called inside the <span class="r-yaml">YAML header</span> of the document, here in the same folder as the `.Rmd` file. 
 
 <div class="div-yaml"> 
 <small>header YAML</small>
@@ -512,7 +519,7 @@ pagetitle: Report with R Markdown
 ```
 </div>
 
-Here in the same folder as the `.Rmd` file. Do:
+Do:
 
 <div class="div-text"> 
 <small>narrative part</small>
@@ -550,7 +557,7 @@ Customize with CSS like this <notes>**dodgerblue** background</notes>.
 
 :::
 
-# Advanced publishing
+# Advanced publishing {data-background-color=#008000}
 
 
 ## Interactivity
@@ -652,6 +659,12 @@ output: html_document
 ```
 </div>
 
+```{=html}
+<iframe width="1000" height="400" src="https://bookdown.org/yihui/rmarkdown/html-document.html#html-document" title="YAML for R Markdown"></iframe>
+```
+
+see [Xie <em>et al.</em>](https://bookdown.org/yihui/rmarkdown/html-document.html#html-document) [-@Xie18]
+
 ## PDF
 
 ::: {.panel-tabset}

teach/stats/r4a/2025/site/index-part1.html

@@ -530,10 +530,11 @@ <h2>Why authoring with R Markdown?</h2>
 </div><div class="column" style="width:40%;">
 <p><img src="https://raw.githubusercontent.com/zoometh/thomashuet/master/img/inst-inrap-archeozoologie-ex2.jpg" style="height: 350px;vertical-align: middle;"></p>
 </div><div class="column" style="width:30%;">
-<p><img src="https://raw.githubusercontent.com/zoometh/thomashuet/master/img/inst-inrap-archeozoologie-ex3.jpg" style="height: 350px;vertical-align: middle;"></p>
-</div><p><small>L’archéozoologie © Inrap</small></p>
+<p><img src="https://raw.githubusercontent.com/zoometh/thomashuet/master/img/inst-inrap-archeozoologie-ex3.png" style="height: 350px;vertical-align: middle;"></p>
 </div>
 </div>
+<p><small>L’archéozoologie © Inrap</small></p>
+</div>
 <div id="tabset-2-2">
 <p><span class="r-md">R Markdown</span> is often enough for academic reporting. It supports:</p>
 <ul>