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Starred repositories

143 stars written in R
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📍 Repel overlapping text labels away from each other in your ggplot2 figures.

R 1,231 95 Updated Nov 4, 2024

Fast, sensitive and accurate integration of single-cell data with Harmony

R 559 102 Updated Nov 11, 2024

R package for MetaboAnalyst

R 338 160 Updated Apr 1, 2025

Advanced High Performance Data Science Toolbox for R by Laurae

R 205 49 Updated Mar 24, 2017

Visualising data frames as funky heatmaps 📊

R 171 11 Updated Mar 31, 2025

Local Fisher Discriminant Analysis in R

R 76 14 Updated Jul 7, 2023

Easily install and load packages from the tidyomcis ecosystem

R 67 Updated Feb 26, 2024

Quantitative Analysis of Mass Spectrometry Data

R 62 26 Updated Aug 20, 2024

R functions for the chemometric analysis of spectra

R 59 21 Updated Feb 3, 2024

Access Orbitrap data in R lang using C# .NET assembly - bioconductor package

R 56 9 Updated Dec 4, 2024

R package for Empirical Bayes Factor Analysis.

R 50 11 Updated Dec 4, 2024

Perform PCA on data with missing values in R

R 50 11 Updated Sep 25, 2023

Core flow cytometry infrastructure

R 49 25 Updated Aug 22, 2024

Mass spectrometry imaging toolbox

R 49 15 Updated Dec 19, 2024

Dynamic Multivariate Data Analysis and Visualization Platform

R 41 32 Updated Nov 8, 2015

Low level infrastructure to handle MS spectra

R 41 27 Updated Mar 7, 2025

The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of mass spectrometry (MS) omics data, in particular proteomic (ei…

R 40 16 Updated Mar 20, 2025

The pls R package

R 37 3 Updated Jan 20, 2025

R package for Multivariate Data Analysis

R 36 11 Updated Aug 3, 2024

Analyze, Process, Identify, and Share, Raman and (FT)IR Spectra

R 29 10 Updated Feb 27, 2025

Scalable and self-optimizing processing workflow for untargeted LC-MS

R 28 4 Updated Aug 3, 2024

Quantitative features for mass spectrometry data

R 27 7 Updated Mar 22, 2025

Intelligent background-correction algorithm for highly fluorescent sample in Raman spectroscopy

R 27 18 Updated Dec 17, 2019

RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.

R 25 7 Updated Mar 25, 2025

MetNormalizer is used to normalize large scale metabolomics data.

R 21 8 Updated Mar 3, 2021

A collection of common mz values found in mass spectrometry.

R 19 8 Updated Jun 13, 2024

An implementation of the Rotation Forest algorithm from Rodriguez et al. 2006

R 18 4 Updated Apr 10, 2013

Creating and using (chemical) compound databases

R 17 16 Updated Jan 17, 2025

The R for Mass Spectrometry meta-package

R 17 8 Updated Dec 24, 2023
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143 stars written in R