terminate called after throwing an instance of 'std::out_of_range' what(): basic_string::substr: __pos (which is 1) > this->size() (which is 0)

[TheBiotech42]

When trying to run the viral-pip pipeline I get stuck at step 2 because of this error:

terminate called after throwing an instance of 'std::out_of_range'
  what():  basic_string::substr: __pos (which is 1) > this->size() (which is 0)

This seems to be an error with the subtring command. I am using centrifuge 1.0.4.

thanks for your help!

[zifanzhu]

Hi there,

Thanks for your question! Could you please share with me the full centrifuge log file?