From 5d67b645b8331ba825d907e61102370018902d08 Mon Sep 17 00:00:00 2001 From: Michael Macias Date: Wed, 4 Sep 2024 11:56:06 -0500 Subject: [PATCH] Bump versions for noodles 0.80.0 --- noodles-bam/CHANGELOG.md | 2 +- noodles-bam/Cargo.toml | 10 +++++----- noodles-bcf/CHANGELOG.md | 2 +- noodles-bcf/Cargo.toml | 8 ++++---- noodles-bed/CHANGELOG.md | 2 +- noodles-bed/Cargo.toml | 2 +- noodles-bgzf/CHANGELOG.md | 2 +- noodles-bgzf/Cargo.toml | 2 +- noodles-cram/CHANGELOG.md | 2 +- noodles-cram/Cargo.toml | 10 +++++----- noodles-csi/CHANGELOG.md | 6 ++++++ noodles-csi/Cargo.toml | 4 ++-- noodles-fasta/CHANGELOG.md | 2 +- noodles-fasta/Cargo.toml | 4 ++-- noodles-gff/CHANGELOG.md | 6 ++++++ noodles-gff/Cargo.toml | 6 +++--- noodles-gtf/CHANGELOG.md | 2 +- noodles-gtf/Cargo.toml | 6 +++--- noodles-sam/CHANGELOG.md | 2 +- noodles-sam/Cargo.toml | 6 +++--- noodles-tabix/CHANGELOG.md | 6 ++++++ noodles-tabix/Cargo.toml | 6 +++--- noodles-util/CHANGELOG.md | 2 +- noodles-util/Cargo.toml | 18 +++++++++--------- noodles-vcf/CHANGELOG.md | 2 +- noodles-vcf/Cargo.toml | 8 ++++---- noodles/CHANGELOG.md | 16 ++++++++++++++++ noodles/Cargo.toml | 26 +++++++++++++------------- 28 files changed, 102 insertions(+), 68 deletions(-) diff --git a/noodles-bam/CHANGELOG.md b/noodles-bam/CHANGELOG.md index c7603de3a..4ab75a22c 100644 --- a/noodles-bam/CHANGELOG.md +++ b/noodles-bam/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.67.0 - 2024-09-04 ### Added diff --git a/noodles-bam/Cargo.toml b/noodles-bam/Cargo.toml index 81548ffca..5f12c1141 100644 --- a/noodles-bam/Cargo.toml +++ b/noodles-bam/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-bam" -version = "0.66.0" +version = "0.67.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -21,14 +21,14 @@ futures = { workspace = true, optional = true, features = ["std"] } indexmap.workspace = true tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } -noodles-bgzf = { path = "../noodles-bgzf", version = "0.32.0" } +noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" } noodles-core = { path = "../noodles-core", version = "0.15.0" } -noodles-csi = { path = "../noodles-csi", version = "0.37.0" } -noodles-sam = { path = "../noodles-sam", version = "0.63.0" } +noodles-csi = { path = "../noodles-csi", version = "0.38.0" } +noodles-sam = { path = "../noodles-sam", version = "0.64.0" } [dev-dependencies] flate2.workspace = true -noodles-sam = { path = "../noodles-sam", version = "0.63.0", features = ["async"] } +noodles-sam = { path = "../noodles-sam", version = "0.64.0", features = ["async"] } tokio = { workspace = true, features = ["io-std", "macros", "rt-multi-thread"] } [package.metadata.docs.rs] diff --git a/noodles-bcf/CHANGELOG.md b/noodles-bcf/CHANGELOG.md index 7d035afe7..9dd60ae88 100644 --- a/noodles-bcf/CHANGELOG.md +++ b/noodles-bcf/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.59.1 - 2024-09-04 ### Fixed diff --git a/noodles-bcf/Cargo.toml b/noodles-bcf/Cargo.toml index e51a2eec5..eb7984f0f 100644 --- a/noodles-bcf/Cargo.toml +++ b/noodles-bcf/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-bcf" -version = "0.59.0" +version = "0.59.1" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -16,10 +16,10 @@ async = ["dep:futures", "dep:tokio", "noodles-bgzf/async", "noodles-csi/async", [dependencies] byteorder.workspace = true indexmap.workspace = true -noodles-bgzf = { path = "../noodles-bgzf", version = "0.32.0" } +noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" } noodles-core = { path = "../noodles-core", version = "0.15.0" } -noodles-csi = { path = "../noodles-csi", version = "0.37.0" } -noodles-vcf = { path = "../noodles-vcf", version = "0.62.0" } +noodles-csi = { path = "../noodles-csi", version = "0.38.0" } +noodles-vcf = { path = "../noodles-vcf", version = "0.63.0" } futures = { workspace = true, optional = true, features = ["std"] } tokio = { workspace = true, optional = true, features = ["io-util"] } diff --git a/noodles-bed/CHANGELOG.md b/noodles-bed/CHANGELOG.md index 2aa21d184..16d5b243f 100644 --- a/noodles-bed/CHANGELOG.md +++ b/noodles-bed/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.16.0 - 2024-09-04 ### Added diff --git a/noodles-bed/Cargo.toml b/noodles-bed/Cargo.toml index 037b213e1..ed6a1cbc6 100644 --- a/noodles-bed/Cargo.toml +++ b/noodles-bed/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-bed" -version = "0.15.0" +version = "0.16.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true diff --git a/noodles-bgzf/CHANGELOG.md b/noodles-bgzf/CHANGELOG.md index 39d619bf6..e80e45885 100644 --- a/noodles-bgzf/CHANGELOG.md +++ b/noodles-bgzf/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.33.0 - 2024-09-04 ### Changed diff --git a/noodles-bgzf/Cargo.toml b/noodles-bgzf/Cargo.toml index 22d4b0655..b39fe6de9 100644 --- a/noodles-bgzf/Cargo.toml +++ b/noodles-bgzf/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-bgzf" -version = "0.32.0" +version = "0.33.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true diff --git a/noodles-cram/CHANGELOG.md b/noodles-cram/CHANGELOG.md index 17f69e14c..af9524c3e 100644 --- a/noodles-cram/CHANGELOG.md +++ b/noodles-cram/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.68.0 - 2024-09-04 ### Added diff --git a/noodles-cram/Cargo.toml b/noodles-cram/Cargo.toml index ce9776e86..ed66e7a48 100644 --- a/noodles-cram/Cargo.toml +++ b/noodles-cram/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-cram" -version = "0.67.0" +version = "0.68.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -23,10 +23,10 @@ bzip2 = "0.4.4" flate2.workspace = true indexmap.workspace = true md-5 = "0.10.0" -noodles-bam = { path = "../noodles-bam", version = "0.66.0" } +noodles-bam = { path = "../noodles-bam", version = "0.67.0" } noodles-core = { path = "../noodles-core", version = "0.15.0" } -noodles-fasta = { path = "../noodles-fasta", version = "0.42.0" } -noodles-sam = { path = "../noodles-sam", version = "0.63.0" } +noodles-fasta = { path = "../noodles-fasta", version = "0.43.0" } +noodles-sam = { path = "../noodles-sam", version = "0.64.0" } xz2 = "0.1.6" async-compression = { version = "0.4.0", optional = true, features = ["gzip", "tokio"] } @@ -37,7 +37,7 @@ tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } libdeflater = { workspace = true, optional = true } [dev-dependencies] -noodles-sam = { path = "../noodles-sam", version = "0.63.0", features = ["async"] } +noodles-sam = { path = "../noodles-sam", version = "0.64.0", features = ["async"] } tokio = { workspace = true, features = ["io-std", "macros", "rt-multi-thread"] } [package.metadata.docs.rs] diff --git a/noodles-csi/CHANGELOG.md b/noodles-csi/CHANGELOG.md index eb18ee5d4..395eaa2d1 100644 --- a/noodles-csi/CHANGELOG.md +++ b/noodles-csi/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.38.0 - 2024-09-04 + +### Changed + + * csi: Sync dependencies. + ## 0.37.0 - 2024-07-14 ### Changed diff --git a/noodles-csi/Cargo.toml b/noodles-csi/Cargo.toml index d34208f88..7b2268249 100644 --- a/noodles-csi/Cargo.toml +++ b/noodles-csi/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-csi" -version = "0.37.0" +version = "0.38.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -17,7 +17,7 @@ async = ["dep:tokio", "noodles-bgzf/async"] bit-vec = "0.8.0" byteorder.workspace = true indexmap.workspace = true -noodles-bgzf = { path = "../noodles-bgzf", version = "0.32.0" } +noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" } noodles-core = { path = "../noodles-core", version = "0.15.0" } tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } diff --git a/noodles-fasta/CHANGELOG.md b/noodles-fasta/CHANGELOG.md index 64b54666e..45053c068 100644 --- a/noodles-fasta/CHANGELOG.md +++ b/noodles-fasta/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.43.0 - 2024-09-04 ### Changed diff --git a/noodles-fasta/Cargo.toml b/noodles-fasta/Cargo.toml index 906fd2359..2167f501c 100644 --- a/noodles-fasta/Cargo.toml +++ b/noodles-fasta/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-fasta" -version = "0.42.0" +version = "0.43.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -17,7 +17,7 @@ async = ["dep:tokio"] bstr.workspace = true bytes.workspace = true memchr.workspace = true -noodles-bgzf = { path = "../noodles-bgzf", version = "0.32.0" } +noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" } noodles-core = { path = "../noodles-core", version = "0.15.0" } tokio = { workspace = true, optional = true, features = ["io-util"] } diff --git a/noodles-gff/CHANGELOG.md b/noodles-gff/CHANGELOG.md index e66992222..824f06abf 100644 --- a/noodles-gff/CHANGELOG.md +++ b/noodles-gff/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.36.0 - 2024-09-04 + +### Changed + + * gff: Sync dependencies. + ## 0.35.0 - 2024-07-14 ### Changed diff --git a/noodles-gff/Cargo.toml b/noodles-gff/Cargo.toml index 0cd8b8ef2..9e2f5d1ba 100644 --- a/noodles-gff/Cargo.toml +++ b/noodles-gff/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-gff" -version = "0.35.0" +version = "0.36.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -15,9 +15,9 @@ async = ["dep:futures", "dep:tokio"] [dependencies] indexmap.workspace = true -noodles-bgzf = { path = "../noodles-bgzf", version = "0.32.0" } +noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" } noodles-core = { path = "../noodles-core", version = "0.15.0" } -noodles-csi = { path = "../noodles-csi", version = "0.37.0" } +noodles-csi = { path = "../noodles-csi", version = "0.38.0" } percent-encoding.workspace = true futures = { workspace = true, optional = true, features = ["std"] } diff --git a/noodles-gtf/CHANGELOG.md b/noodles-gtf/CHANGELOG.md index 5a74e224c..6c0aeb792 100644 --- a/noodles-gtf/CHANGELOG.md +++ b/noodles-gtf/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.31.0 - 2024-09-04 ### Changed diff --git a/noodles-gtf/Cargo.toml b/noodles-gtf/Cargo.toml index cf9694f84..10a2894b2 100644 --- a/noodles-gtf/Cargo.toml +++ b/noodles-gtf/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-gtf" -version = "0.30.0" +version = "0.31.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -11,6 +11,6 @@ repository = "https://github.com/zaeleus/noodles" documentation = "https://docs.rs/noodles-gtf" [dependencies] -noodles-bgzf = { path = "../noodles-bgzf", version = "0.32.0" } +noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" } noodles-core = { path = "../noodles-core", version = "0.15.0" } -noodles-csi = { path = "../noodles-csi", version = "0.37.0" } +noodles-csi = { path = "../noodles-csi", version = "0.38.0" } diff --git a/noodles-sam/CHANGELOG.md b/noodles-sam/CHANGELOG.md index fc9095f0b..a5899fd69 100644 --- a/noodles-sam/CHANGELOG.md +++ b/noodles-sam/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.64.0 - 2024-09-04 ### Changed diff --git a/noodles-sam/Cargo.toml b/noodles-sam/Cargo.toml index b73027a29..4a733698f 100644 --- a/noodles-sam/Cargo.toml +++ b/noodles-sam/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-sam" -version = "0.63.0" +version = "0.64.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -19,9 +19,9 @@ bstr.workspace = true indexmap.workspace = true lexical-core.workspace = true memchr.workspace = true -noodles-bgzf = { path = "../noodles-bgzf", version = "0.32.0" } +noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" } noodles-core = { path = "../noodles-core", version = "0.15.0" } -noodles-csi = { path = "../noodles-csi", version = "0.37.0" } +noodles-csi = { path = "../noodles-csi", version = "0.38.0" } futures = { workspace = true, optional = true, features = ["std"] } tokio = { workspace = true, optional = true, features = ["io-util"] } diff --git a/noodles-tabix/CHANGELOG.md b/noodles-tabix/CHANGELOG.md index 2893ab375..7bafffe15 100644 --- a/noodles-tabix/CHANGELOG.md +++ b/noodles-tabix/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.44.0 - 2024-09-04 + +### Changed + + * tabix: Sync dependencies. + ## 0.43.0 - 2024-07-14 ### Changed diff --git a/noodles-tabix/Cargo.toml b/noodles-tabix/Cargo.toml index c8179450a..909cdb5aa 100644 --- a/noodles-tabix/Cargo.toml +++ b/noodles-tabix/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-tabix" -version = "0.43.0" +version = "0.44.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -16,9 +16,9 @@ async = ["dep:tokio", "noodles-bgzf/async"] [dependencies] byteorder.workspace = true indexmap.workspace = true -noodles-bgzf = { path = "../noodles-bgzf", version = "0.32.0" } +noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" } noodles-core = { path = "../noodles-core", version = "0.15.0" } -noodles-csi = { path = "../noodles-csi", version = "0.37.0" } +noodles-csi = { path = "../noodles-csi", version = "0.38.0" } tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } diff --git a/noodles-util/CHANGELOG.md b/noodles-util/CHANGELOG.md index c6164d1e7..eaa4aa2e3 100644 --- a/noodles-util/CHANGELOG.md +++ b/noodles-util/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.51.0 - 2024-09-04 ### Added diff --git a/noodles-util/Cargo.toml b/noodles-util/Cargo.toml index 6eb21b779..3b8d9463e 100644 --- a/noodles-util/Cargo.toml +++ b/noodles-util/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-util" -version = "0.50.0" +version = "0.51.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -40,15 +40,15 @@ variant = [ [dependencies] flate2 = { workspace = true } -noodles-bam = { path = "../noodles-bam", version = "0.66.0", optional = true } -noodles-bcf = { path = "../noodles-bcf", version = "0.59.0", optional = true } -noodles-bgzf = { path = "../noodles-bgzf", version = "0.32.0", optional = true } +noodles-bam = { path = "../noodles-bam", version = "0.67.0", optional = true } +noodles-bcf = { path = "../noodles-bcf", version = "0.59.1", optional = true } +noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0", optional = true } noodles-core = { path = "../noodles-core", version = "0.15.0", optional = true } -noodles-cram = { path = "../noodles-cram", version = "0.67.0", optional = true } -noodles-csi = { path = "../noodles-csi", version = "0.37.0", optional = true } -noodles-fasta = { path = "../noodles-fasta", version = "0.42.0", optional = true } -noodles-sam = { path = "../noodles-sam", version = "0.63.0", optional = true } -noodles-vcf = { path = "../noodles-vcf", version = "0.62.0", optional = true } +noodles-cram = { path = "../noodles-cram", version = "0.68.0", optional = true } +noodles-csi = { path = "../noodles-csi", version = "0.38.0", optional = true } +noodles-fasta = { path = "../noodles-fasta", version = "0.43.0", optional = true } +noodles-sam = { path = "../noodles-sam", version = "0.64.0", optional = true } +noodles-vcf = { path = "../noodles-vcf", version = "0.63.0", optional = true } futures = { workspace = true, optional = true, features = ["std"] } tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } diff --git a/noodles-vcf/CHANGELOG.md b/noodles-vcf/CHANGELOG.md index 6f734dda8..01deac94a 100644 --- a/noodles-vcf/CHANGELOG.md +++ b/noodles-vcf/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.63.0 - 2024-09-04 ### Added diff --git a/noodles-vcf/Cargo.toml b/noodles-vcf/Cargo.toml index 21b608b9a..10e1e5ffa 100644 --- a/noodles-vcf/Cargo.toml +++ b/noodles-vcf/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-vcf" -version = "0.62.0" +version = "0.63.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -16,10 +16,10 @@ async = ["dep:futures", "dep:pin-project-lite", "dep:tokio", "noodles-bgzf/async [dependencies] indexmap.workspace = true memchr.workspace = true -noodles-bgzf = { path = "../noodles-bgzf", version = "0.32.0" } +noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" } noodles-core = { path = "../noodles-core", version = "0.15.0" } -noodles-csi = { path = "../noodles-csi", version = "0.37.0" } -noodles-tabix = { path = "../noodles-tabix", version = "0.43.0" } +noodles-csi = { path = "../noodles-csi", version = "0.38.0" } +noodles-tabix = { path = "../noodles-tabix", version = "0.44.0" } percent-encoding.workspace = true futures = { workspace = true, optional = true, features = ["std"] } diff --git a/noodles/CHANGELOG.md b/noodles/CHANGELOG.md index af76db2f6..4d8c876c0 100644 --- a/noodles/CHANGELOG.md +++ b/noodles/CHANGELOG.md @@ -1,5 +1,21 @@ # Changelog +## 0.80.0 - 2024-09-04 + + * [noodles-bam 0.67.0](https://github.com/zaeleus/noodles/blob/noodles-bam-0.67.0/noodles-bam/CHANGELOG.md) + * [noodles-bcf 0.59.1](https://github.com/zaeleus/noodles/blob/noodles-bcf-0.59.1/noodles-bcf/CHANGELOG.md) + * [noodles-bed 0.16.0](https://github.com/zaeleus/noodles/blob/noodles-bed-0.16.0/noodles-bed/CHANGELOG.md) + * [noodles-bgzf 0.33.0](https://github.com/zaeleus/noodles/blob/noodles-bgzf-0.33.0/noodles-bgzf/CHANGELOG.md) + * [noodles-cram 0.68.0](https://github.com/zaeleus/noodles/blob/noodles-cram-0.68.0/noodles-cram/CHANGELOG.md) + * [noodles-csi 0.38.0](https://github.com/zaeleus/noodles/blob/noodles-csi-0.38.0/noodles-csi/CHANGELOG.md) + * [noodles-fasta 0.43.0](https://github.com/zaeleus/noodles/blob/noodles-fasta-0.43.0/noodles-fasta/CHANGELOG.md) + * [noodles-gff 0.36.0](https://github.com/zaeleus/noodles/blob/noodles-gff-0.36.0/noodles-gff/CHANGELOG.md) + * [noodles-gtf 0.31.0](https://github.com/zaeleus/noodles/blob/noodles-gtf-0.31.0/noodles-gtf/CHANGELOG.md) + * [noodles-sam 0.64.0](https://github.com/zaeleus/noodles/blob/noodles-sam-0.64.0/noodles-sam/CHANGELOG.md) + * [noodles-tabix 0.44.0](https://github.com/zaeleus/noodles/blob/noodles-tabix-0.44.0/noodles-tabix/CHANGELOG.md) + * [noodles-util 0.51.0](https://github.com/zaeleus/noodles/blob/noodles-util-0.51.0/noodles-util/CHANGELOG.md) + * [noodles-vcf 0.63.0](https://github.com/zaeleus/noodles/blob/noodles-vcf-0.63.0/noodles-vcf/CHANGELOG.md) + ## 0.79.0 - 2024-08-04 * [noodles-bam 0.66.0](https://github.com/zaeleus/noodles/blob/noodles-bam-0.66.0/noodles-bam/CHANGELOG.md) diff --git a/noodles/Cargo.toml b/noodles/Cargo.toml index 6c677b8d5..63d0fe859 100644 --- a/noodles/Cargo.toml +++ b/noodles/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles" -version = "0.79.0" +version = "0.80.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -12,22 +12,22 @@ documentation = "https://docs.rs/noodles" readme = "../README.md" [dependencies] -noodles-bam = { path = "../noodles-bam", version = "0.66.0", optional = true } -noodles-bcf = { path = "../noodles-bcf", version = "0.59.0", optional = true } -noodles-bed = { path = "../noodles-bed", version = "0.15.0", optional = true } -noodles-bgzf = { path = "../noodles-bgzf", version = "0.32.0", optional = true } +noodles-bam = { path = "../noodles-bam", version = "0.67.0", optional = true } +noodles-bcf = { path = "../noodles-bcf", version = "0.59.1", optional = true } +noodles-bed = { path = "../noodles-bed", version = "0.16.0", optional = true } +noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0", optional = true } noodles-core = { path = "../noodles-core", version = "0.15.0", optional = true } -noodles-cram = { path = "../noodles-cram", version = "0.67.0", optional = true } -noodles-csi = { path = "../noodles-csi", version = "0.37.0", optional = true } -noodles-fasta = { path = "../noodles-fasta", version = "0.42.0", optional = true } +noodles-cram = { path = "../noodles-cram", version = "0.68.0", optional = true } +noodles-csi = { path = "../noodles-csi", version = "0.38.0", optional = true } +noodles-fasta = { path = "../noodles-fasta", version = "0.43.0", optional = true } noodles-fastq = { path = "../noodles-fastq", version = "0.14.0", optional = true } -noodles-gff = { path = "../noodles-gff", version = "0.35.0", optional = true } -noodles-gtf = { path = "../noodles-gtf", version = "0.30.0", optional = true } +noodles-gff = { path = "../noodles-gff", version = "0.36.0", optional = true } +noodles-gtf = { path = "../noodles-gtf", version = "0.31.0", optional = true } noodles-htsget = { path = "../noodles-htsget", version = "0.6.0", optional = true } noodles-refget = { path = "../noodles-refget", version = "0.5.0", optional = true } -noodles-sam = { path = "../noodles-sam", version = "0.63.0", optional = true } -noodles-tabix = { path = "../noodles-tabix", version = "0.43.0", optional = true } -noodles-vcf = { path = "../noodles-vcf", version = "0.62.0", optional = true } +noodles-sam = { path = "../noodles-sam", version = "0.64.0", optional = true } +noodles-tabix = { path = "../noodles-tabix", version = "0.44.0", optional = true } +noodles-vcf = { path = "../noodles-vcf", version = "0.63.0", optional = true } [features] default = []