From 128fcfef16bf3cd458ddf8203b603b6bbc8254c4 Mon Sep 17 00:00:00 2001 From: Michael Macias Date: Thu, 1 Feb 2024 16:11:53 -0600 Subject: [PATCH] Bump versions for noodles 0.62.0 --- README.md | 2 +- noodles-bam/CHANGELOG.md | 2 +- noodles-bam/Cargo.toml | 6 +++--- noodles-cram/CHANGELOG.md | 6 ++++++ noodles-cram/Cargo.toml | 8 ++++---- noodles-sam/CHANGELOG.md | 2 +- noodles-sam/Cargo.toml | 2 +- noodles-util/CHANGELOG.md | 6 ++++++ noodles-util/Cargo.toml | 8 ++++---- noodles/CHANGELOG.md | 7 +++++++ noodles/Cargo.toml | 8 ++++---- 11 files changed, 38 insertions(+), 19 deletions(-) diff --git a/README.md b/README.md index 00bc8d7b5..ecc8d7d2c 100644 --- a/README.md +++ b/README.md @@ -20,7 +20,7 @@ list; and formats, listed as [features]. For example, to work with the BAM format, enable the `bam` feature. ```toml -noodles = { version = "0.61.0", features = ["bam"] } +noodles = { version = "0.62.0", features = ["bam"] } ``` Each enabled feature can then be imported by its re-exported name, e.g., diff --git a/noodles-bam/CHANGELOG.md b/noodles-bam/CHANGELOG.md index 471a1deae..4f4c90615 100644 --- a/noodles-bam/CHANGELOG.md +++ b/noodles-bam/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.54.0 - 2024-02-01 ### Changed diff --git a/noodles-bam/Cargo.toml b/noodles-bam/Cargo.toml index cf6700463..edcc98ac3 100644 --- a/noodles-bam/Cargo.toml +++ b/noodles-bam/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-bam" -version = "0.53.0" +version = "0.54.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -25,10 +25,10 @@ tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } noodles-bgzf = { path = "../noodles-bgzf", version = "0.26.0" } noodles-core = { path = "../noodles-core", version = "0.14.0" } noodles-csi = { path = "../noodles-csi", version = "0.30.0" } -noodles-sam = { path = "../noodles-sam", version = "0.50.0" } +noodles-sam = { path = "../noodles-sam", version = "0.51.0" } [dev-dependencies] -noodles-sam = { path = "../noodles-sam", version = "0.50.0", features = ["async"] } +noodles-sam = { path = "../noodles-sam", version = "0.51.0", features = ["async"] } tokio = { workspace = true, features = ["io-std", "macros", "rt-multi-thread"] } [package.metadata.docs.rs] diff --git a/noodles-cram/CHANGELOG.md b/noodles-cram/CHANGELOG.md index 305c4e1c9..ad4605dd7 100644 --- a/noodles-cram/CHANGELOG.md +++ b/noodles-cram/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.53.0 - 2024-02-01 + +### Changed + + * cram: Sync dependencies. + ## 0.52.0 - 2024-01-25 ### Added diff --git a/noodles-cram/Cargo.toml b/noodles-cram/Cargo.toml index 2fb83bbdf..19a0a5f31 100644 --- a/noodles-cram/Cargo.toml +++ b/noodles-cram/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-cram" -version = "0.52.0" +version = "0.53.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -23,10 +23,10 @@ bzip2 = "0.4.4" flate2.workspace = true indexmap.workspace = true md-5 = "0.10.0" -noodles-bam = { path = "../noodles-bam", version = "0.53.0" } +noodles-bam = { path = "../noodles-bam", version = "0.54.0" } noodles-core = { path = "../noodles-core", version = "0.14.0" } noodles-fasta = { path = "../noodles-fasta", version = "0.32.0" } -noodles-sam = { path = "../noodles-sam", version = "0.50.0" } +noodles-sam = { path = "../noodles-sam", version = "0.51.0" } xz2 = "0.1.6" async-compression = { version = "0.4.0", optional = true, features = ["gzip", "tokio"] } @@ -37,7 +37,7 @@ tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } libdeflater = { workspace = true, optional = true } [dev-dependencies] -noodles-sam = { path = "../noodles-sam", version = "0.50.0", features = ["async"] } +noodles-sam = { path = "../noodles-sam", version = "0.51.0", features = ["async"] } tokio = { workspace = true, features = ["io-std", "macros", "rt-multi-thread"] } [package.metadata.docs.rs] diff --git a/noodles-sam/CHANGELOG.md b/noodles-sam/CHANGELOG.md index 9bdaee4e2..05d2188d1 100644 --- a/noodles-sam/CHANGELOG.md +++ b/noodles-sam/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.51.0 - 2024-02-01 ### Changed diff --git a/noodles-sam/Cargo.toml b/noodles-sam/Cargo.toml index 02df5c3fa..6a64707e3 100644 --- a/noodles-sam/Cargo.toml +++ b/noodles-sam/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-sam" -version = "0.50.0" +version = "0.51.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true diff --git a/noodles-util/CHANGELOG.md b/noodles-util/CHANGELOG.md index 263afd662..cce903768 100644 --- a/noodles-util/CHANGELOG.md +++ b/noodles-util/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.34.0 - 2024-02-01 + +### Changed + + * util: Sync dependencies. + ## 0.33.0 - 2024-01-25 ### Added diff --git a/noodles-util/Cargo.toml b/noodles-util/Cargo.toml index cc031c14e..7f473c4e1 100644 --- a/noodles-util/Cargo.toml +++ b/noodles-util/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-util" -version = "0.33.0" +version = "0.34.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -30,14 +30,14 @@ variant = [ [dependencies] flate2 = { workspace = true } -noodles-bam = { path = "../noodles-bam", version = "0.53.0", optional = true } +noodles-bam = { path = "../noodles-bam", version = "0.54.0", optional = true } noodles-bcf = { path = "../noodles-bcf", version = "0.46.0", optional = true } noodles-bgzf = { path = "../noodles-bgzf", version = "0.26.0", optional = true } noodles-core = { path = "../noodles-core", version = "0.14.0", optional = true } -noodles-cram = { path = "../noodles-cram", version = "0.52.0", optional = true } +noodles-cram = { path = "../noodles-cram", version = "0.53.0", optional = true } noodles-csi = { path = "../noodles-csi", version = "0.30.0", optional = true } noodles-fasta = { path = "../noodles-fasta", version = "0.32.0", optional = true } -noodles-sam = { path = "../noodles-sam", version = "0.50.0", optional = true } +noodles-sam = { path = "../noodles-sam", version = "0.51.0", optional = true } noodles-vcf = { path = "../noodles-vcf", version = "0.49.0", optional = true } [package.metadata.docs.rs] diff --git a/noodles/CHANGELOG.md b/noodles/CHANGELOG.md index c00c9eb7d..501bf1419 100644 --- a/noodles/CHANGELOG.md +++ b/noodles/CHANGELOG.md @@ -1,5 +1,12 @@ # Changelog +## 0.62.0 - 2024-02-01 + + * [noodles-bam 0.54.0](https://github.com/zaeleus/noodles/blob/noodles-bam-0.54.0/noodles-bam/CHANGELOG.md) + * [noodles-cram 0.53.0](https://github.com/zaeleus/noodles/blob/noodles-cram-0.53.0/noodles-cram/CHANGELOG.md) + * [noodles-sam 0.51.0](https://github.com/zaeleus/noodles/blob/noodles-sam-0.51.0/noodles-sam/CHANGELOG.md) + * [noodles-util 0.34.0](https://github.com/zaeleus/noodles/blob/noodles-util-0.34.0/noodles-util/CHANGELOG.md) + ## 0.61.0 - 2024-01-25 * [noodles-bam 0.53.0](https://github.com/zaeleus/noodles/blob/noodles-bam-0.53.0/noodles-bam/CHANGELOG.md) diff --git a/noodles/Cargo.toml b/noodles/Cargo.toml index 09dc8cbfc..453e649ad 100644 --- a/noodles/Cargo.toml +++ b/noodles/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles" -version = "0.61.0" +version = "0.62.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -12,12 +12,12 @@ documentation = "https://docs.rs/noodles" readme = "../README.md" [dependencies] -noodles-bam = { path = "../noodles-bam", version = "0.53.0", optional = true } +noodles-bam = { path = "../noodles-bam", version = "0.54.0", optional = true } noodles-bcf = { path = "../noodles-bcf", version = "0.46.0", optional = true } noodles-bed = { path = "../noodles-bed", version = "0.12.0", optional = true } noodles-bgzf = { path = "../noodles-bgzf", version = "0.26.0", optional = true } noodles-core = { path = "../noodles-core", version = "0.14.0", optional = true } -noodles-cram = { path = "../noodles-cram", version = "0.52.0", optional = true } +noodles-cram = { path = "../noodles-cram", version = "0.53.0", optional = true } noodles-csi = { path = "../noodles-csi", version = "0.30.0", optional = true } noodles-fasta = { path = "../noodles-fasta", version = "0.32.0", optional = true } noodles-fastq = { path = "../noodles-fastq", version = "0.10.0", optional = true } @@ -25,7 +25,7 @@ noodles-gff = { path = "../noodles-gff", version = "0.27.0", optional = true } noodles-gtf = { path = "../noodles-gtf", version = "0.23.0", optional = true } noodles-htsget = { path = "../noodles-htsget", version = "0.4.0", optional = true } noodles-refget = { path = "../noodles-refget", version = "0.3.0", optional = true } -noodles-sam = { path = "../noodles-sam", version = "0.50.0", optional = true } +noodles-sam = { path = "../noodles-sam", version = "0.51.0", optional = true } noodles-tabix = { path = "../noodles-tabix", version = "0.36.0", optional = true } noodles-vcf = { path = "../noodles-vcf", version = "0.49.0", optional = true }