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Fix markdown links
Updated Home (markdown)
add link to configuration file apge
add oplog progress file page link
added link to "resyncing the connector" page
added link to "usage with authentication" page
added link to "system overview" page
added link to "running the tests" page
added link to "writing your own docmanager" page
added link to "usage with mongodb" page
Added small intro paragraph with link to FAQ
added usage with elasticsearch link
Getting Started page
added installation bullet + link
wrote a TOC. Contents will be added later
Initial Commit