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I find that the 2022 bigbed files display the matrix identifiers while those for 2020 display the TF name, at least as displayed in IGV, as pictured below.
I expect this is in error.
The text was updated successfully, but these errors were encountered:
This is expected. We changed that since a TF can have multiple TF binding profiles in JASPAR. To avoid confusion about which profile is used, we now provide the profile name. Nevertheless, the bigbeds contain the TF name as an extra field.
While comparing
http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2020/JASPAR2020_danRer11.bb
http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2022/JASPAR2022_danRer11.bb
I find that the 2022 bigbed files display the matrix identifiers while those for 2020 display the TF name, at least as displayed in IGV, as pictured below.
I expect this is in error.
The text was updated successfully, but these errors were encountered: